Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20k20
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.22
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 32 0.39
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 0.51
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 31 0.67
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 31 0.67
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 31 0.67
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 31 0.67
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 31 0.67
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 31 0.89
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.89
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.89
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.89
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.89
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 30 1.2
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 30 1.6
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical p... 28 4.8
Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical p... 28 4.8
U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein. 28 4.8
U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein. 28 4.8
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 28 4.8
U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein. 28 4.8
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 28 4.8
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 28 4.8
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical... 28 6.3
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 27 8.3
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 27 8.3
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 190 MAWFA---DLAGKAETLLNNLDEQTGAALRNHNVVKARKQENS 309
M+W + D+AG AE LLN LDE+TG A++N R +++S
Sbjct: 1 MSWLSKVSDIAGAAENLLNKLDEKTGDAIQNARDSAPRTRKSS 43
>Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 190 MAWFA---DLAGKAETLLNNLDEQTGAALRNHNVVKARKQENS 309
M+W + D+AG AE LLN LDE+TG A++N R +++S
Sbjct: 1 MSWLSKVSDIAGAAENLLNKLDEKTGDAIQNARDSAPRTRKSS 43
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 469 NQEPVRNGFAKTKKPLKKSNQYTLDNCPDTLV----CDTKGSNTDHF 597
N E + AK + + K+N Y+L NC DTL KG N DHF
Sbjct: 191 NMELSKQNEAKRSEEMHKANLYSLINCVDTLANLHQALEKGENADHF 237
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical protein
M79.1c protein.
Length = 1209
Score = 32.7 bits (71), Expect = 0.22
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Frame = +1
Query: 319 LHPDPSWNQRKRPIPRNLKKISPVPE------PRSNYTPARKISPIQNLNKS----PVKG 468
+HP N R I LKK S PE ++ T + SP +LNKS P+K
Sbjct: 762 MHPASGENVFLRQIRSKLKKRSETPELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKN 821
Query: 469 NQEPVRNGFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSL 624
E N + P+ S ++ PD+ D+ T G+ +H++
Sbjct: 822 APEFSENHSRVSPVPVPPSRNASVSVRPDSKAEDSSDETTKDVGMWGPKHAV 873
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical protein
M79.1b protein.
Length = 1214
Score = 32.7 bits (71), Expect = 0.22
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Frame = +1
Query: 319 LHPDPSWNQRKRPIPRNLKKISPVPE------PRSNYTPARKISPIQNLNKS----PVKG 468
+HP N R I LKK S PE ++ T + SP +LNKS P+K
Sbjct: 767 MHPASGENVFLRQIRSKLKKRSETPELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKN 826
Query: 469 NQEPVRNGFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSL 624
E N + P+ S ++ PD+ D+ T G+ +H++
Sbjct: 827 APEFSENHSRVSPVPVPPSRNASVSVRPDSKAEDSSDETTKDVGMWGPKHAV 878
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical protein
M79.1a protein.
Length = 1224
Score = 32.7 bits (71), Expect = 0.22
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Frame = +1
Query: 319 LHPDPSWNQRKRPIPRNLKKISPVPE------PRSNYTPARKISPIQNLNKS----PVKG 468
+HP N R I LKK S PE ++ T + SP +LNKS P+K
Sbjct: 777 MHPASGENVFLRQIRSKLKKRSETPELDHIDSDTADETTKSEKSPFGSLNKSSIKYPIKN 836
Query: 469 NQEPVRNGFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSL 624
E N + P+ S ++ PD+ D+ T G+ +H++
Sbjct: 837 APEFSENHSRVSPVPVPPSRNASVSVRPDSKAEDSSDETTKDVGMWGPKHAV 888
>Z35604-7|CAA84682.1| 304|Caenorhabditis elegans Hypothetical
protein ZK1058.9 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 337 WNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKPL 516
W++ P+ + S V R +YTP R+IS + N+N GN R A P
Sbjct: 109 WSRENTPVDNEKRYASHV---RRSYTPVREISAVNNVN----DGNLHRSRTPLATVTAPY 161
Query: 517 KKSNQYTLDNCP 552
+ Y +N P
Sbjct: 162 HTNIHYRSENEP 173
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 283 VKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPA-RKISPIQNLNKSP 459
V+ +Q ++ P P Q RP P + PVP+P+ PA R ++P +L + P
Sbjct: 322 VRPNEQFQQPRVVRPQPQ-QQLTRPAPARPQTRRPVPQPQQATRPAPRPVAPKSHLAQQP 380
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 256 GAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISP 435
G L+N +K++ + P P + +P P+ K P P+P+ N P K P
Sbjct: 148 GGVLKNEPKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP 207
Score = 31.1 bits (67), Expect = 0.67
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 325 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP-VKGNQEPVRNGFAK 501
P P+ +P P+ K P PEP+ P K P N N P K +P K
Sbjct: 195 PKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPK 254
Query: 502 TKKPLK 519
K LK
Sbjct: 255 PKTKLK 260
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 PVRN-GFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLP 627
PV+N GFA TK+ + + T T CD GS T + L +R +P
Sbjct: 191 PVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGIGSPTKVWSLMVKRDEIP 241
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 PVRN-GFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLP 627
PV+N GFA TK+ + + T T CD GS T + L +R +P
Sbjct: 194 PVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGIGSPTKVWSLMVKRDEIP 244
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 PVRN-GFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLP 627
PV+N GFA TK+ + + T T CD GS T + L +R +P
Sbjct: 194 PVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGIGSPTKVWSLMVKRDEIP 244
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 PVRN-GFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSLP 627
PV+N GFA TK+ + + T T CD GS T + L +R +P
Sbjct: 194 PVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGIGSPTKVWSLMVKRDEIP 244
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 31.1 bits (67), Expect = 0.67
Identities = 26/115 (22%), Positives = 52/115 (45%)
Frame = +1
Query: 280 VVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSP 459
+++ + + +S + +PS + K P P+ K P P+P+ + PA+ +SP P
Sbjct: 661 IMRKKSKPSSSEVPPAEPSAPEPK-PAPKPDPKPDPKPDPKPDPVPAKPVSP-------P 712
Query: 460 VKGNQEPVRNGFAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHSL 624
V + + P+ + T++ +L+C+T+ S D F HS+
Sbjct: 713 VIVPIDSI------VPAPVVEDKSRTVEQPQASLLCETQDSCRDDFASALADHSV 761
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 331 PSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKK 510
P ++K+P + KK +P +P+ A+ + + K P ++P + A TK+
Sbjct: 338 PKSAEKKKP---DTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKR 394
Query: 511 P 513
P
Sbjct: 395 P 395
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 343 QRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKPLKK 522
+ K P K SP + +S PA +N KSP K + P ++ + K P +K
Sbjct: 1563 KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEK 1622
Query: 523 S 525
S
Sbjct: 1623 S 1623
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 343 QRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKPLKK 522
+ K P K SP + +S PA +N KSP K + P ++ + K P +K
Sbjct: 1563 KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEK 1622
Query: 523 S 525
S
Sbjct: 1623 S 1623
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 343 QRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKPLKK 522
+ K P K SP + +S PA +N KSP K + P ++ + K P +K
Sbjct: 1563 KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEK 1622
Query: 523 S 525
S
Sbjct: 1623 S 1623
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 343 QRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKPLKK 522
+ K P K SP + +S PA +N KSP K + P ++ + K P +K
Sbjct: 1563 KEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEK 1622
Query: 523 S 525
S
Sbjct: 1623 S 1623
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 277 NVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPR--SNYTPARKISPIQNLN 450
+++ K + DF L+ + + P RN + P+ R S +R++ P+ +
Sbjct: 333 SLLSKMKDDTEDFDLNRRMT---NRSPKKRNSIRSPPMDVTRRISGMLTSRRVDPMDEIL 389
Query: 451 KSPVKGNQEPVRNGFAKTKKPLKKSNQ 531
++ ++ ++EPV TK P K +Q
Sbjct: 390 ENMIEKDEEPVSCPSTSTKNPFKSISQ 416
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 277 NVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPR--SNYTPARKISPIQNLN 450
+++ K + DF L+ + + P RN + P+ R S +R++ P+ +
Sbjct: 333 SLLSKMKDDTEDFDLNRRMT---NRSPKKRNSIRSPPMDVTRRISGMLTSRRVDPMDEIL 389
Query: 451 KSPVKGNQEPVRNGFAKTKKPLKKSNQ 531
++ ++ ++EPV TK P K +Q
Sbjct: 390 ENMIEKDEEPVSCPSTSTKNPFKSISQ 416
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 355 PIPRNLKKISPVPEPRSNYTPA-RKISPIQNLNKSPVKGNQEPVRNGFAKTKKPLK 519
P +LK + P P+ +K++P K+PV +EP +KTK+P K
Sbjct: 555 PAKESLKPKADTKAPAKPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEK 610
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 409 YTPARKISPIQNLNKSPVKGNQEPVRNGFAKTKKP 513
+ P + P+QN+ P K E V+NG+A ++P
Sbjct: 527 HEPRQASEPLQNVQPEPSKQASELVQNGYAAPQEP 561
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 243 RRANRSSPTQSQCCEGT*TRKLRFYLTSRPFLEPKKKANTTKFKENFTRSRATFK 407
RR+ S+ G R+L FY S+ + KKK +K FT +R TFK
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQKKKEELSKVDTKFTITR-TFK 324
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 427 ISPIQNLNKSPVKGNQEPVRNGFAKTKKPLKKSNQYTLDNCPD 555
IS + +PV+GN E V NGF K +K + ++ Q + + D
Sbjct: 226 ISSPAPVKAAPVEGNGEEVENGFTKNEK-MSEATQSEMSDSED 267
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 243 RRANRSSPTQSQCCEGT*TRKLRFYLTSRPFLEPKKKANTTKFKENFTRSRATFK 407
RR+ S+ G R+L FY S+ + KKK +K FT +R TFK
Sbjct: 271 RRSPTSTHRPWTSTRGPFVRRLTFYDASQALINQKKKEELSKVDTKFTITR-TFK 324
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 PIPRNLKKISPVPE-PRSNYTPARKISPIQNLNKSPVKGNQEPVR 486
P P+ K S P PR +P++ SP +SP K Q P R
Sbjct: 422 PAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRR 466
>Z81030-16|CAB02712.2| 378|Caenorhabditis elegans Hypothetical
protein C01G10.11a protein.
Length = 378
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 205 DLAGKAETLLNNLDEQTGAALRNHNVVKA 291
+ +G E L+ N DE+ A L++H V A
Sbjct: 50 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 78
>Z81030-15|CAC70075.2| 369|Caenorhabditis elegans Hypothetical
protein C01G10.11b protein.
Length = 369
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 205 DLAGKAETLLNNLDEQTGAALRNHNVVKA 291
+ +G E L+ N DE+ A L++H V A
Sbjct: 50 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 78
>U60059-1|AAC47518.1| 376|Caenorhabditis elegans UNC-76 protein.
Length = 376
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 205 DLAGKAETLLNNLDEQTGAALRNHNVVKA 291
+ +G E L+ N DE+ A L++H V A
Sbjct: 57 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 85
>U60058-1|AAC47517.1| 379|Caenorhabditis elegans UNC-76 protein.
Length = 379
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 205 DLAGKAETLLNNLDEQTGAALRNHNVVKA 291
+ +G E L+ N DE+ A L++H V A
Sbjct: 51 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 79
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 466 GNQEPVRNG-FAKTKKPLKKSNQYTLDNC 549
GNQ NG FA +K +NQ+T+D+C
Sbjct: 385 GNQPLYHNGSFANIEKSNPHNNQFTIDSC 413
>U28153-1|AAA68954.1| 385|Caenorhabditis elegans UNC-76 protein.
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 205 DLAGKAETLLNNLDEQTGAALRNHNVVKA 291
+ +G E L+ N DE+ A L++H V A
Sbjct: 57 EFSGSLEDLVGNFDEKIAACLKDHEVTTA 85
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 250 QTGAALRNHNVVKAR--KQENSDFILHPDPSWNQRKRPIP 363
+ G+ LR +AR + ++ D HP PS RK P+P
Sbjct: 98 ENGSCLRRRKRFRARGGQDDDDDDFHHPAPSKISRKNPLP 137
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 250 QTGAALRNHNVVKAR--KQENSDFILHPDPSWNQRKRPIP 363
+ G+ LR +AR + ++ D HP PS RK P+P
Sbjct: 98 ENGSCLRRRKRFRARGGQDDDDDDFHHPAPSKISRKNPLP 137
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 253 TGAALRNHNVVKARKQENSDFILHPDPSWNQRKRPIPRNLKKISPVPEPRSNYTPAR-KI 429
TG +L++ + + P PS N K +N+ K +P+ N P R +I
Sbjct: 59 TGNSLKSSASSTQSTEAKPPPVQFPPPSKNPPKHVHQQNVSKSPLIPQLPRNQVPTRPQI 118
Query: 430 SPIQNLNKSP 459
+ +Q++ + P
Sbjct: 119 NTVQSVQQKP 128
>AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical
protein Y37D8A.11a protein.
Length = 499
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Frame = +1
Query: 286 KARKQENSDFILHPDPSWNQRKRPIPRN-----LKKISPVPE-----PRSNYTPARKISP 435
KA+ +E+S L DP RK +K+++ E P+ +I P
Sbjct: 139 KAKAEESSQNALKVDPPLTTRKSSRTTTEATGAMKRLTVAQETEDEAPKETVQKKARIEP 198
Query: 436 IQNLNKSPVKGNQEPVRNGFAKTKKPLKKSNQYTLD 543
+ + +S KG+ P+R K+ K + +SN D
Sbjct: 199 VDSAEESKAKGSTAPMR----KSAKKVGESNSEATD 230
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 NQRKRPIPRNLKKISPVPEP-RSNYTPARKISPIQNLNKSPV 462
N++ R R+ KK+ P P R + +P+ K SP ++ + SP+
Sbjct: 264 NRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPRRSRSASPM 305
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 493 FAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHS 621
FA++ + + ++T D +CD + +DH L +RHS
Sbjct: 265 FARSDELTRHMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHS 307
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 493 FAKTKKPLKKSNQYTLDNCPDTLVCDTKGSNTDHFGLRQRRHS 621
FA++ + + ++T D +CD + +DH L +RHS
Sbjct: 271 FARSDELTRHMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHS 313
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 325 PDPSWNQRKRPIPRNLKKISPVPEPRSNYTPARKISPIQNLNKSPV 462
P P + PIP+ + P+P+P+ P K P L P+
Sbjct: 230 PKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPM 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,162,590
Number of Sequences: 27780
Number of extensions: 305849
Number of successful extensions: 1212
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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