Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20k13
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0094 - 5583932-5584036,5584137-5584200,5584305-5584387,558... 182 2e-46
03_06_0061 + 31352703-31353037,31353145-31353274,31353708-313539... 165 2e-41
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 154 5e-38
03_06_0052 - 31295839-31295883,31296312-31296380,31296458-312965... 100 1e-21
12_01_0639 + 5383967-5385951,5386973-5387066,5387410-5387841,538... 33 0.20
11_02_0032 + 7564153-7564719,7564844-7565128,7565207-7565524,756... 33 0.26
08_02_0881 - 22216657-22216780,22216918-22217056,22217120-222171... 32 0.34
10_08_0365 + 17224777-17224852,17224949-17224989,17225175-172252... 29 2.4
01_05_0406 + 21875376-21875451,21875570-21875610,21876245-218763... 29 2.4
04_04_0503 - 25701050-25701343,25701431-25701528,25701629-257016... 29 3.2
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 29 4.2
01_01_0752 - 5808798-5810183 28 5.6
01_01_0691 - 5328169-5328228,5328300-5328488,5328611-5328768,532... 28 5.6
10_08_0741 + 20235463-20235497,20237624-20237753,20238748-202389... 28 7.4
10_01_0322 + 3516922-3517899 28 7.4
04_01_0105 + 1098551-1100392 28 7.4
02_04_0243 + 21244743-21245837,21245921-21246148,21246240-212464... 28 7.4
01_05_0438 + 22142646-22143659,22144319-22144858 28 7.4
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 27 9.7
02_05_0642 + 30576158-30576289,30576436-30576503,30577167-305774... 27 9.7
02_01_0457 - 3283759-3285240 27 9.7
>03_02_0094 -
5583932-5584036,5584137-5584200,5584305-5584387,
5584523-5584588,5584711-5584801,5585259-5585392,
5586219-5586413,5586886-5587015,5587873-5587958
Length = 317
Score = 182 bits (443), Expect = 2e-46
Identities = 83/139 (59%), Positives = 102/139 (73%)
Frame = +1
Query: 232 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXX 411
S ARVYADVN RPREYWDYE+ V+WG Q+DY++VRK+GRGKYSEVFE IN+TN+E
Sbjct: 2 STARVYADVNVHRPREYWDYEALAVEWGEQDDYEVVRKVGRGKYSEVFEGINVTNDERCI 61
Query: 412 XXXXXXXXXXXXXXXXXXLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYS 591
L+NL GG NI+ L +V+D S+TP+LIFE+VN+TDFK LY
Sbjct: 62 IKILKPVKKKKIKREIKILQNLCGGPNIVKLHNIVRDQQSKTPSLIFEYVNSTDFKVLYP 121
Query: 592 TLSDYDIRYYLYELLKALD 648
TL+DYDIR+Y+YELLKALD
Sbjct: 122 TLTDYDIRFYIYELLKALD 140
>03_06_0061 +
31352703-31353037,31353145-31353274,31353708-31353902,
31354696-31354725,31355238-31355395,31355756-31355846,
31355924-31355989,31356331-31356413,31356495-31356558,
31356641-31356709,31356798-31356833
Length = 418
Score = 165 bits (402), Expect = 2e-41
Identities = 78/138 (56%), Positives = 94/138 (68%)
Frame = +1
Query: 232 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXX 411
S ARVYAD NSQRP+EYWDYES ++WG Q+ Y+++RKLGRGKYSEVFE +E
Sbjct: 85 SVARVYADANSQRPKEYWDYESLDIEWGEQDGYEVLRKLGRGKYSEVFEGFRPGGDERCV 144
Query: 412 XXXXXXXXXXXXXXXXXXLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYS 591
L+NL GG NI+ L VV+D S+TP+LIFE+VNNTDFK LY
Sbjct: 145 IKILKPVKKKKIKREIKILQNLYGGPNIVKLLDVVRDDESKTPSLIFEYVNNTDFKVLYP 204
Query: 592 TLSDYDIRYYLYELLKAL 645
TL DYDIRYY+YELLK +
Sbjct: 205 TLLDYDIRYYIYELLKVI 222
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 154 bits (374), Expect = 5e-38
Identities = 70/122 (57%), Positives = 86/122 (70%)
Frame = +1
Query: 283 WDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXX 462
WDYE+ + WG Q+DY++VRK+GRGKYSEVFE IN+ NNE
Sbjct: 70 WDYEALTIRWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIK 129
Query: 463 XLENLRGGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYSTLSDYDIRYYLYELLKA 642
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY TL+DYDIRYY+YELLKA
Sbjct: 130 ILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKA 189
Query: 643 LD 648
LD
Sbjct: 190 LD 191
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 232 SRARVYADVNSQRPREYWDYESYVVDWGNQE 324
S+ARVY DVN RP+EYWDYE+ V WG Q+
Sbjct: 2 SKARVYTDVNVLRPKEYWDYEALTVQWGVQQ 32
>03_06_0052 -
31295839-31295883,31296312-31296380,31296458-31296521,
31296598-31296680,31297243-31297308,31297426-31297516,
31298090-31298247,31298432-31298476,31299189-31299318,
31300685-31300935
Length = 333
Score = 100 bits (239), Expect = 1e-21
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +1
Query: 232 SRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 402
S+ARVYADVN RP+EYWDYE+ V WG Q+DY++VRK+GRGKYSEVFE IN+ NNE
Sbjct: 57 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNE 113
>12_01_0639 + 5383967-5385951,5386973-5387066,5387410-5387841,
5387935-5388219,5388324-5388641,5388756-5388983,
5389264-5389364,5389447-5389552,5389782-5390132,
5390262-5390401,5390687-5390861,5390937-5390954
Length = 1410
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +1
Query: 322 EDYQLVRKLGRGKYSEVFEAINIT--NNEXXXXXXXXXXXXXXXXXXXXXLENLR--GGT 489
+ ++ + K+G+G YS V++A ++ N ++ LR
Sbjct: 830 DSFEKLDKIGQGTYSIVYKARDLETGNIVALKKVRFVNMDPESVRFMAREIKILRTLDHP 889
Query: 490 NIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYST----LSDYDIRYYLYELLKALD 648
N+I LQ +V VS++ L+FE++ + D L +T LS+ I+ ++ +LL LD
Sbjct: 890 NVIKLQGIVTSRVSQSLYLVFEYMEH-DLSGLIATPGLKLSEPQIKCFVQQLLHGLD 945
>11_02_0032 +
7564153-7564719,7564844-7565128,7565207-7565524,
7565612-7565839,7566662-7566762,7566852-7566933,
7567230-7567364,7567460-7567516,7568030-7568167
Length = 636
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Frame = +1
Query: 322 EDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLENL----RGGT 489
E ++ + K+G G YS V++A ++ + E L
Sbjct: 182 ESFEKLGKIGEGTYSSVYKARDLKTGKIVALKKVRFVNLDPESVRFMAREILVLRKLNHP 241
Query: 490 NIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYST----LSDYDIRYYLYELLKALD 648
N+I L+ ++ PVS + L+FE++ + D L +T ++ ++ + +LL LD
Sbjct: 242 NVIKLEGIIASPVSTSLYLVFEYMEH-DLTGLAATPGLKFTEPQVKCLMQQLLSGLD 297
>08_02_0881 -
22216657-22216780,22216918-22217056,22217120-22217192,
22218260-22218357,22218516-22218542,22218625-22218715,
22218819-22218900,22219983-22220098
Length = 249
Score = 32.3 bits (70), Expect = 0.34
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 495
++ +RK+G G Y EVFEA++I E E NI
Sbjct: 27 FRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENI 86
Query: 496 ISLQAVVKDPVSRTPA-------------LIFEHVNNTDFKQLYSTLSDYDIRYYLYELL 636
I L+ +V P + A ++FE++++ D K++ + ++YY+ +LL
Sbjct: 87 IRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDH-DLKKVLHHSTPSQVKYYMEQLL 145
Query: 637 KAL 645
K L
Sbjct: 146 KGL 148
>10_08_0365 +
17224777-17224852,17224949-17224989,17225175-17225244,
17225338-17225486,17225940-17226035,17226481-17226551,
17227077-17227138,17227311-17227374,17227463-17227547,
17227631-17227757,17228241-17228374,17228808-17229122
Length = 429
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNE 402
Y+L RK+G G + E++ +NI N E
Sbjct: 9 YKLGRKIGSGSFGELYLGVNIHNGE 33
>01_05_0406 +
21875376-21875451,21875570-21875610,21876245-21876314,
21876410-21876558,21876671-21876766,21876863-21876933,
21877119-21877267,21877400-21877463,21877547-21877631,
21878079-21878139,21879005-21879144,21879266-21879559
Length = 431
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNE 402
Y+L RKLG G + E++ N+ NE
Sbjct: 9 YRLGRKLGSGSFGEIYLGTNVQTNE 33
>04_04_0503 -
25701050-25701343,25701431-25701528,25701629-25701689,
25701772-25701842,25701922-25702048,25702160-25702244,
25702346-25702409,25702732-25702793,25703214-25703284,
25703700-25703795,25703960-25704108,25704196-25704265,
25704483-25704523,25704668-25704743
Length = 454
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNE 402
++L +K+G G + E++ A+NI N+E
Sbjct: 9 FKLGKKIGSGSFGELYLAVNIQNSE 33
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Frame = +1
Query: 322 EDYQLVRKLGRGKYSEVFEAINITNNEXXXXXXXXXXXXXXXXXXXXXLEN--LR--GGT 489
E ++ + K+G+G YS V++A ++ + + E LR
Sbjct: 181 ESFEKLDKIGQGTYSSVYKARDLESGKIVALKKVRFANMDPESVRFMAREIHILRRLDHP 240
Query: 490 NIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYST----LSDYDIRYYLYELLKALD 648
N+I L+ +V +S + L+FE++ + D L +T ++ ++ Y+ +LL L+
Sbjct: 241 NVIKLEGLVTSRMSSSLYLVFEYMEH-DLAGLAATPGIKFTEPQVKCYMQQLLSGLE 296
>01_01_0752 - 5808798-5810183
Length = 461
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNE 402
Y+L R LG+G +++V+ A N+ +N+
Sbjct: 12 YELGRMLGQGTFAKVYHARNLASNQ 36
>01_01_0691 -
5328169-5328228,5328300-5328488,5328611-5328768,
5329677-5329767,5330359-5330438,5330472-5330533,
5330603-5330730,5331290-5331508,5331586-5331715,
5331804-5331870,5331968-5332062,5332150-5332221,
5332307-5332362,5332485-5332554,5332662-5332735,
5332820-5332954,5334135-5334314
Length = 621
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 304 VDWGNQEDYQLVRKLGRGKYSEVFEAINITN 396
V GN Y+L RKLG+G + +V+ I++
Sbjct: 61 VQIGNSPTYKLERKLGKGGFGQVYVGRRISS 91
>10_08_0741 +
20235463-20235497,20237624-20237753,20238748-20238915,
20239097-20239429,20239647-20239830,20239904-20240076
Length = 340
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 484 GTNIISLQAVVKDPV--SRTPALIFEHVNNTDFKQLYST---LSDYDIRYYLYELLKAL 645
G+ II+++ +++ P + I + +TD Q+ + L+D +Y+LY+LL+ L
Sbjct: 63 GSQIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGL 121
>10_01_0322 + 3516922-3517899
Length = 325
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 481 GGTNIISLQAVVKDPVSRTPALIFEHVNNTDFKQLYSTLSDYDIRYYLYELLKA 642
G NI+ ++ VV DP S L+ E V + +L + +R+ + +L+ A
Sbjct: 103 GHPNIVQIKDVVADPKSGDVFLVMEFVEGSLRDELPRARPEKQVRFMMRQLIGA 156
>04_01_0105 + 1098551-1100392
Length = 613
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 379 LQILHCISRDPACEPTDSLLGC 314
LQ+ H + RD EPT +L C
Sbjct: 361 LQLFHAMERDHGVEPTPDILAC 382
>02_04_0243 +
21244743-21245837,21245921-21246148,21246240-21246458,
21246557-21247000,21247440-21247547,21247790-21247909
Length = 737
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 EDYQLVRKLGRGKYSEVFEAINITNN-----EXXXXXXXXXXXXXXXXXXXXXLENLRGG 486
+ ++ + K+G+G YS V++A ++ + L L G
Sbjct: 156 DTFERLDKIGQGTYSNVYKARDLETGKVVALKRVRFVNMDPESVRFMAREIHVLRRLDGH 215
Query: 487 TNIISLQAVVKDPVSRTPALIFEHVNN 567
N++ L+ +V +S + L+FE++++
Sbjct: 216 PNVVRLEGIVTSRLSHSLYLVFEYMDH 242
>01_05_0438 + 22142646-22143659,22144319-22144858
Length = 517
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 301 VVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 402
VV +G+ E Y +R +G G VF A ++ E
Sbjct: 67 VVPFGSMESYDRLRLIGEGACGAVFRARHVATGE 100
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 226 VPSRARVYADVNSQRPREYWD--YESYVVDWGNQEDYQLVRKL 348
VP + A + + +PREYW Y S ++ G +D R++
Sbjct: 376 VPLAIIIIASLLANKPREYWSEVYNSIGLEHGYNDDVDNTRRI 418
>02_05_0642 +
30576158-30576289,30576436-30576503,30577167-30577487,
30578318-30579146
Length = 449
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 514 VKDPVSRTPALIFEHVNNTDFKQLYS 591
+ P SRT + EHV N DF YS
Sbjct: 73 ISQPCSRTIIITNEHVQNADFPPNYS 98
>02_01_0457 - 3283759-3285240
Length = 493
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +1
Query: 328 YQLVRKLGRGKYSEVFEAINITNNE 402
Y++ R+LG+G +++V+ A N+T+ +
Sbjct: 12 YEIGRQLGQGNFAKVYYARNLTSGQ 36
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,133,800
Number of Sequences: 37544
Number of extensions: 221821
Number of successful extensions: 560
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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