Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20k10
(226 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p pro... 95 1e-20
AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p pro... 95 1e-20
AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal pr... 95 1e-20
AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,... 95 1e-20
AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,... 95 1e-20
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 72 1e-13
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 27 2.7
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 27 2.7
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 27 2.7
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 27 2.7
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 27 2.7
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 27 2.7
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 27 2.7
AE014296-3343|AAF51583.1| 334|Drosophila melanogaster CG13247-P... 27 4.7
AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.... 26 8.2
>BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p
protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 133
P VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 197 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p
protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 133
P VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 197 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal
protein L8 protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 133
P VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 197 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,
isoform B protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 133
P VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 197 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,
isoform A protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 133
P VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 197 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 71.7 bits (168), Expect = 1e-13
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2
Query: 2 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 100
P VRGVAMNPVEHPHGGGNHQHIGKASTVKR T
Sbjct: 152 PKVRGVAMNPVEHPHGGGNHQHIGKASTVKRRT 184
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 420 GMGMGP-EHRHGHGHHAHSHGHPHAPKQTVSNRPIG 454
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 409 GMGMGP-EHGHGHGHHAHSHGHPHAPKQTVSNRPIG 443
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 415 GMGMGP-EHGHGHGHHAHSHGHPHAPKQTVSNRPIG 449
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 420 GMGMGP-EHGHGHGHHAHSHGHPHAPKQTVSNRPIG 454
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 26 NPVEHPHGGGNHQHIGKASTVKRGTSAG 109
N E P GGG + +G A T RGT G
Sbjct: 1059 NTTEKPAGGGTTE-VGAAGTAGRGTGGG 1085
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 420 GMGMGP-EHGHGHGHHAHSHGHPHAPKQTVSNRPIG 454
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 14 GVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 121
G+ M P EH HG G+H H + T + R +G
Sbjct: 420 GMGMGP-EHGHGHGHHAHSHGHPHAPKQTVSNRPIG 454
>AE014296-3343|AAF51583.1| 334|Drosophila melanogaster CG13247-PA
protein.
Length = 334
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 171 VSVLPPRILPVLRAAIRPTLRPADVP 94
V+ PP + P+ AA+ P +P D P
Sbjct: 105 VTTPPPTMRPITSAAVPPIFKPIDPP 130
>AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.2
protein.
Length = 2160
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 35 EHPHGGGNHQHIGKASTVKRG 97
+HP GGN + G+ S V++G
Sbjct: 161 DHPESGGNAERAGQHSQVEQG 181
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,798
Number of Sequences: 53049
Number of extensions: 159483
Number of successful extensions: 793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 24,988,368
effective HSP length: 54
effective length of database: 22,123,722
effective search space used: 442474440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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