Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20j21
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0891 + 8775537-8776127,8776403-8776513 33 0.18
07_03_0439 + 18212584-18213065,18214164-18215010 33 0.18
01_06_0956 - 33343503-33344086,33344225-33344384 33 0.18
04_04_1584 + 34601927-34602144,34603324-34603510,34604239-346044... 31 0.42
04_04_1438 - 33609242-33609349,33609571-33609663,33609840-336098... 31 0.55
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694... 31 0.55
08_01_1010 - 10215625-10216335,10216372-10216473 30 0.97
06_02_0173 - 12601025-12601071,12601632-12601698,12601857-126019... 29 1.7
03_05_0645 - 26381559-26381819,26381899-26382105 29 2.2
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917 29 2.2
01_03_0130 + 12853325-12853948,12854657-12854822,12854907-128551... 29 2.2
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 29 3.0
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.0
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 29 3.0
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237... 29 3.0
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 29 3.0
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162... 28 3.9
02_01_0059 + 430227-430268,430347-430724 28 3.9
01_06_1638 + 38812226-38812660,38812989-38813063,38813180-388132... 28 3.9
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 28 3.9
11_06_0695 - 26340161-26340804,26342057-26343429,26344074-263441... 28 5.2
08_02_0822 + 21549257-21550729,21550776-21550877 28 5.2
01_07_0360 + 43056226-43057566 28 5.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 5.2
09_01_0025 - 441528-444284 27 6.8
07_01_0253 + 1888831-1889399,1890121-1890526,1890980-1891195,189... 27 6.8
01_04_0051 + 15430980-15431591 27 6.8
10_08_0176 + 15432092-15432470,15432592-15432688,15432801-154329... 27 9.0
08_02_1354 - 26337628-26338540,26339638-26339981 27 9.0
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 9.0
07_03_1788 + 29523216-29524867,29525048-29525075 27 9.0
04_03_0388 + 15299303-15299374,15301295-15301402,15301483-15301749 27 9.0
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 27 9.0
03_01_0272 + 2105579-2105671,2105779-2105882,2106006-2107014,210... 27 9.0
02_02_0135 + 7096911-7098440 27 9.0
01_06_0854 - 32477994-32478161,32478689-32478826,32479225-324794... 27 9.0
01_06_0549 + 30149016-30149761,30149922-30150088,30150236-301503... 27 9.0
>08_01_0891 + 8775537-8776127,8776403-8776513
Length = 233
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -2
Query: 188 RRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGNARHRSAPRALTVARRVRPDRRPL 9
RRR A A S A ++AA VRW + G+ R +A + RR+ RR L
Sbjct: 96 RRRQAAAAAEAKSSAAPASAAAAAARRVRWHEMAFGSVRVPAAMDMGEIRRRLHARRRRL 155
Query: 8 SH 3
++
Sbjct: 156 AY 157
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -3
Query: 145 RREYGAARLAAPRSGGRGRVAATLDTVQPRG 53
RR G ARL +PR RGRV A L V+ RG
Sbjct: 183 RRRQGPARLRSPRWRVRGRVGAPLRRVEARG 213
>01_06_0956 - 33343503-33344086,33344225-33344384
Length = 247
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 188 RRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGNARHRS 63
+RR A P P +QA VWS A A QR G+ +HRS
Sbjct: 140 KRRTAPAPMPLPPAQAPVWSPAPAPAAT--QRRHSGHKKHRS 179
>04_04_1584 +
34601927-34602144,34603324-34603510,34604239-34604496,
34604866-34604965,34608523-34608639,34608704-34608804,
34609035-34610141
Length = 695
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 332 IRAITEGSAGGPPQYSDDAACRAAVLVRDXDTAATHSRSLIYLYRDTRHS 481
IR I PP + A+C V+V D AA S+ + YR TR+S
Sbjct: 64 IRQIERCHGRSPPPGASLASCVCVVVVEGNDPAAVGSQEIAVPYRYTRYS 113
>04_04_1438 -
33609242-33609349,33609571-33609663,33609840-33609884,
33610000-33610055,33610362-33610468,33610605-33610806,
33611068-33611122,33611129-33611167,33611664-33611725,
33611875-33611988,33612618-33612627,33612750-33612835,
33613008-33613377
Length = 448
Score = 31.1 bits (67), Expect = 0.55
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 66 TVSSVAATRPLPPDRGAAS---RAAPYSRL--GDGRVLRYSSVAPPATLHTRG 209
+++S AA R LPP R AAS RA RL G VLR SS +P + T G
Sbjct: 8 SLASSAAHRRLPPSRSAASSILRAPNRGRLCPGSPSVLRASSSSPSSPQPTAG 60
>01_02_0036 +
10468636-10468938,10469014-10469109,10469247-10469453,
10470762-10471097,10471469-10471582,10471634-10471639
Length = 353
Score = 31.1 bits (67), Expect = 0.55
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 238 RSAGDGLLSSPLVCNVAGGATLEYRSTRPSPRREYGAARLAAPRSGGRGRVAATLDTVQP 59
R GDG SSP + N AGG + R + E AA A + AA L +P
Sbjct: 243 RGGGDGDASSPSLSNAAGGGGGGNKMRRVGGQDETAAAAPARENGEQQAAAAAELPCRKP 302
Query: 58 R 56
R
Sbjct: 303 R 303
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 30.3 bits (65), Expect = 0.97
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 327 TESEPLQKVALEGPHSTRTMQHAGPQYSSGTXTPPRHIRAP*SIYTETLDTREGHK--HL 500
T + P + + + ST + A P Y+ T TPPR +P YT + R +
Sbjct: 107 TPTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASP--NYTPSTPQRHAASPDYT 164
Query: 501 PSTP 512
PSTP
Sbjct: 165 PSTP 168
>06_02_0173 -
12601025-12601071,12601632-12601698,12601857-12601934,
12602235-12602396,12603309-12603440,12604604-12604656,
12605808-12606372
Length = 367
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 69 VSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
+S A +P PP AA+ Y+ DG + Y PP T ++PSP +R
Sbjct: 20 MSKSGALQPQPPHGAAAAVRLAYTH--DG-IAVYKHTPPPPVYQTPAAVAAPSPPVR 73
>03_05_0645 - 26381559-26381819,26381899-26382105
Length = 155
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 175 LEYRSTRPSPRREYGAARLAAPRSGGRGRVAATLD 71
+EYRS +P+ YG A A SGG V ++
Sbjct: 106 MEYRSLQPAGAASYGGASAGASTSGGGSAVVRGME 140
>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
Length = 447
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2
Query: 164 QHAPVSQAGVWSSAAGGPAVRWQRTSRGNARHRSAPRA 51
Q AP +A V SSA+ +VRW+R + +AR R++ A
Sbjct: 340 QSAPRQRASVSSSASEASSVRWER--QASARRRASLEA 375
>01_03_0130 +
12853325-12853948,12854657-12854822,12854907-12855118,
12855372-12855865,12856228-12856276,12856367-12856690
Length = 622
Score = 29.1 bits (62), Expect = 2.2
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +3
Query: 84 ATRPLPPD-RGAASRAAPYSRLGDGRVLRYSSVAPPATLHTRGEESSPSPALREVLQIIR 260
AT P+P D R A S P+ RVL + P T +S + A E +
Sbjct: 75 ATPPIPSDPRAAVSGNLPFF----DRVL-FPDTFPVETPPPSSAAASAAAAADEEVASAL 129
Query: 261 EAWTEPTSLFDRW*VAGQSSVLTESEPLQKVALEGPHSTRTMQH 392
+A E + + W + ++ V EP+ VA E P T T+ +
Sbjct: 130 KAREETEAEREAWRLLRRAVVSYCGEPVGTVAAEDPECTETLNY 173
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 93 PLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPATLHT 203
P P R A+ AAPY +G R + S+APP T+ T
Sbjct: 261 PNPRSRFPAAEAAPYVPVGHFR-MPCHSMAPPVTVRT 296
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 268 QASRMI*STSRSAGDGLLSSPLVCNVAGGA 179
Q S+ + S SAG+G +SSP V +VA G+
Sbjct: 217 QVSQPLFPVSTSAGNGAVSSPYVASVAPGS 246
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 41 LQLEPSGLNGVERCRDSSSATGPRGRQPRCSILPPG 148
L + G G CR ++SA+ P+GR+ + +LP G
Sbjct: 323 LSVSKQGDTGGGHCRRANSASPPQGRRQQGLLLPQG 358
>04_04_0910 -
29321128-29321276,29321977-29322508,29323301-29323706,
29323933-29324028,29324563-29324645,29326620-29326732,
29327156-29327315
Length = 512
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 452 SGSANVSRRCLCPGRVLRPGMLHRPSTVGALQRYLL*W 339
S +A +SR C G LRP RPS VG R + W
Sbjct: 318 SEAARMSRHGACAGGALRPS-ARRPSAVGRRPRVSVAW 354
>01_05_0655 -
23972488-23973152,23973193-23973241,23973883-23973940,
23974184-23974215,23975961-23976040,23976509-23977898
Length = 757
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 324 GHLTARLLTSDRTTKWARSRPR--G*SEAPP-AAPAT 223
G L+A L SD WA RPR G S APP A P T
Sbjct: 456 GSLSAMLHGSDDCEVWAVKRPRRSGPSHAPPHAGPGT 492
>02_05_0710 -
31115116-31115214,31115747-31115851,31116210-31116260,
31116393-31116494,31116651-31116883,31117306-31117497,
31118142-31118322,31118424-31118623,31119105-31119645
Length = 567
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -2
Query: 191 GRRRDAGVPQHAPVSQAGVWSSAAGGPA-VRWQRTSRGNARHRSAPRALTVARRVRPDRR 15
GR+ A HAP S V S+AA PA R R + RH AP +R P RR
Sbjct: 15 GRKHKAAAENHAPASP--VASTAADNPAPAAAGRRGRKSRRH-EAPADADGSRPPSPPRR 71
>02_01_0059 + 430227-430268,430347-430724
Length = 139
Score = 28.3 bits (60), Expect = 3.9
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = -2
Query: 266 GLADDLKHLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTS 87
G+++ + + R T + CG R+ Q P Q G WS AA G R
Sbjct: 5 GISEGIDTVELEAREYRQSTQLVECGGGREGPSRQEPPRCQRGQWSVAAAGKDFA-GRNH 63
Query: 86 RGNARHRSAPRALTVAR-RVR-PDRR 15
G + R A V R R R P RR
Sbjct: 64 HGIGKGRLRCSAAEVGRPRCREPPRR 89
>01_06_1638 +
38812226-38812660,38812989-38813063,38813180-38813284,
38813387-38813472,38813554-38813674,38813761-38813840,
38814005-38814067,38814205-38814326,38814429-38814514,
38814626-38814750,38814883-38814911,38815188-38815333,
38815643-38815822,38816445-38816585
Length = 597
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 332 IRAITEGSAGGPPQYSDDAACRAAVLV 412
+RA+ EG G PP S AA A V +
Sbjct: 497 VRAMEEGRGGDPPSSSSSAAAAAGVAI 523
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 28.3 bits (60), Expect = 3.9
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 247 STSRSAGDGLLSSPLVCNVAGGATLEYRSTRPSP-RREYGAARL-AAPRSGGRGRVAA 80
S RSA G S+ L A TL RS RP+P R AAR ++P GGR AA
Sbjct: 94 SHHRSASQGGGSADLPPVRAVSRTLGLRSARPAPCGRGATAARANSSPYGGGRSAPAA 151
>11_06_0695 -
26340161-26340804,26342057-26343429,26344074-26344173,
26345230-26345362,26346857-26347258
Length = 883
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 227 RRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVR---WQRTSRGNARHRSAP 57
RR LL + G GV PV+ ++ AAGGPA +R+ AR R
Sbjct: 2 RRLLLLPLLVLAGAAVGGGV---VPVAARSAFACAAGGPAATLPFCRRSLPARARARDLV 58
Query: 56 RALTVARRVR 27
LT A +VR
Sbjct: 59 ARLTRAEKVR 68
>08_02_0822 + 21549257-21550729,21550776-21550877
Length = 524
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 368 PQYSDDAACRAAVLVRDXDTAATHSRSLIYLYRDTRHSRGTQTFAEHSGI 517
P ++++C +++L DT++ + + DTRH G Q HSGI
Sbjct: 226 PHLLEESSCSSSLLSNHRDTSSERAIQVGENAEDTRH--GDQLKQSHSGI 273
>01_07_0360 + 43056226-43057566
Length = 446
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 58 GAERCRALPRLVLCHRTAGPPAALLHTPA 144
G + C A + CH P LLH PA
Sbjct: 333 GHQMCAACTLAICCHSKPNPKTLLLHPPA 361
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 80 CRDSSSATGPRGRQPRCSILPP 145
C S + T PR R+P S LPP
Sbjct: 250 CSSSDTVTTPRNRKPELSKLPP 271
>09_01_0025 - 441528-444284
Length = 918
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 69 VSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPATLHT 203
VSSV A PP A+R + G G +L +S + PPATLHT
Sbjct: 45 VSSVFA----PPSLAVANRNENGNGNGYGPLL-FSPLPPPATLHT 84
>07_01_0253 +
1888831-1889399,1890121-1890526,1890980-1891195,
1891441-1891548,1892085-1892359,1892462-1892714
Length = 608
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 90 RPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPA----TLHTRGEESSPSP 230
+P PP R + AA SRL + Y ++ PPA T EE+S +P
Sbjct: 23 KPSPPRRLRLAAAAAASRLQNPTTTHYPNLPPPAPPPSTSLVAAEEASLAP 73
>01_04_0051 + 15430980-15431591
Length = 203
Score = 27.5 bits (58), Expect = 6.8
Identities = 27/77 (35%), Positives = 32/77 (41%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGNARHR 66
H RRR ALL RR + G P+ P W++AA P R T R R
Sbjct: 107 HRRALRRRPALL-------RRIELGSPRTPPWLPPH-WAAAAQRPWPRGSTTPSWRCRRR 158
Query: 65 SAPRALTVARRVRPDRR 15
A ARR+R RR
Sbjct: 159 MEAGARGGARRLRRRRR 175
>10_08_0176 +
15432092-15432470,15432592-15432688,15432801-15432985,
15433012-15433056,15433447-15433472,15435299-15435434,
15435608-15435702
Length = 320
Score = 27.1 bits (57), Expect = 9.0
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Frame = +3
Query: 93 PLPPDRGAASRAAPYSRLGDGR---------VLRYSSVAPPATLHT-RGEESSPSPALRE 242
P PP AA+ AA SRL R + R SV P A G S PSP +
Sbjct: 20 PPPPPAAAAASAAAASRLLPRRPTASILLLPLRRLCSVPPHAVGDAGTGSSSQPSPVMDA 79
Query: 243 VLQIIREAWTEPTSLFDR 296
+ R E ++L DR
Sbjct: 80 QFESFRAQLDESSTLRDR 97
>08_02_1354 - 26337628-26338540,26339638-26339981
Length = 418
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 176 AGVPQHAPVSQAGVWSSAAGGPAVR-WQRTSRGNARHRSAPRA 51
AGVP AP+S A A+ AV W+ + H AP A
Sbjct: 22 AGVPASAPLSAAAAAIPASSEAAVAVWRVDGASHHHHHRAPTA 64
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 217 LSSPLVCNVAGGATLEYRSTRPSPRREYGAARLAAPRSGGRGRVA 83
+S P A A ++R RP+PR A L A GGR R A
Sbjct: 34 VSPPDPATEAPPAPKQHRGPRPAPRNPGSAKPLTAGVPGGRTRRA 78
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 282 KWARSRPRG*SEAPPAAPATDCSPH 208
K R RPR + PP PATD +PH
Sbjct: 20 KRGRGRPRK-NPPPPPPPATDPNPH 43
>04_03_0388 + 15299303-15299374,15301295-15301402,15301483-15301749
Length = 148
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -1
Query: 144 GGSMEQRGWRPRGPVAEDESRQRSTPFSPEGSNCSASRAARPAATLTL 1
GG QR W+ R PV R+ P + C + P TL L
Sbjct: 33 GGLRRQRRWQARAPVGAQHGRRPKYP--GKNGGCKLWQWYEPGTTLYL 78
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 15 PPVGPHATRYS*SPRG*TVSSVAATRPLPPDRGAASRAA 131
PP ATR + SP V+ +AA P AA+RAA
Sbjct: 364 PPARAPATRPAASPAAPHVAPIAAVASAPAAPAAAARAA 402
>03_01_0272 +
2105579-2105671,2105779-2105882,2106006-2107014,
2107130-2107153
Length = 409
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 144 GGSMEQRGWRPRGPVAEDESRQRSTP-FSPEGSNCSAS 34
GG+ E+R R R P R R+TP SP+ + +A+
Sbjct: 9 GGAKERRRRRKRSPAHSPSGRARATPRLSPKKAAAAAA 46
>02_02_0135 + 7096911-7098440
Length = 509
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 277 PLRCSIAGE*PGSQVSSQNQ 336
P CS+AG P S VSS NQ
Sbjct: 284 PSSCSVAGGAPSSAVSSNNQ 303
>01_06_0854 -
32477994-32478161,32478689-32478826,32479225-32479440,
32479580-32479656,32481144-32481555,32482248-32482850,
32482954-32483229
Length = 629
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Frame = -2
Query: 215 LLTSCM*CGRRR------DAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGNARHRSAPR 54
L+ + M CG RR G Q V +SAA A W+R G
Sbjct: 286 LVKNAMNCGARRLPLEAAAEGGGQRPEGGVRAVATSAAAAVAGGWRRREEGGRDDVRGTD 345
Query: 53 ALTVARRVRPDRRP 12
L AR+ R RRP
Sbjct: 346 GLVGARKERSSRRP 359
>01_06_0549 +
30149016-30149761,30149922-30150088,30150236-30150320,
30150499-30150658
Length = 385
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 75 STPFSPEGSNCSASRAARPAATLT 4
STP SP S SA+ RPA T T
Sbjct: 130 STPSSPAPSRSSATTTTRPAPTTT 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,074,423
Number of Sequences: 37544
Number of extensions: 455184
Number of successful extensions: 2100
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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