Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20j21
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ310522-1|CAC83859.1| 1563|Homo sapiens synemin protein. 32 1.0
BC151243-1|AAI51244.1| 1565|Homo sapiens desmuslin protein. 32 1.4
AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein. 32 1.4
AK124013-1|BAC85752.1| 168|Homo sapiens protein ( Homo sapiens ... 31 2.4
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 31 3.2
AK096917-1|BAC04894.1| 129|Homo sapiens protein ( Homo sapiens ... 30 5.6
BC106877-1|AAI06878.1| 663|Homo sapiens chromosome 1 open readi... 29 7.4
AK001763-1|BAA91892.1| 663|Homo sapiens protein ( Homo sapiens ... 29 7.4
AK001583-1|BAA91771.1| 220|Homo sapiens protein ( Homo sapiens ... 29 7.4
BC041761-1|AAH41761.2| 792|Homo sapiens DOCK5 protein protein. 29 9.8
AK126024-1|BAC86398.1| 166|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK024687-1|BAB14962.1| 274|Homo sapiens protein ( Homo sapiens ... 29 9.8
>AJ310522-1|CAC83859.1| 1563|Homo sapiens synemin protein.
Length = 1563
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 306 AGQSSVLTESEPLQKVALEGPHSTRTMQHAGPQYSSGTXTPPRHIR 443
+G+ +V+TE Q V E P +G + +SG RHIR
Sbjct: 1358 SGRQTVMTEKSTFQSVVSESPQEDSAEDTSGAEMTSGVSRSFRHIR 1403
>BC151243-1|AAI51244.1| 1565|Homo sapiens desmuslin protein.
Length = 1565
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 306 AGQSSVLTESEPLQKVALEGPHSTRTMQHAGPQYSSGTXTPPRHIR 443
+G+ +V+TE Q V E P +G + +SG RHIR
Sbjct: 1360 SGRQTVMTEKSTFQSVVSESPQEDSAGDTSGAEMTSGVSRSFRHIR 1405
>AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein.
Length = 1614
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 306 AGQSSVLTESEPLQKVALEGPHSTRTMQHAGPQYSSGTXTPPRHIR 443
+G+ +V+TE Q V E P +G + +SG RHIR
Sbjct: 1409 SGRQTVMTEKSTFQSVVSESPQEDSAGDTSGAEMTSGVSRSFRHIR 1454
>AK124013-1|BAC85752.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ42019 fis, clone SPLEN2034081. ).
Length = 168
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 321 HLTARLLTSDRTTKWARSRPRG*SEAPPAAPATDCSPHLLYVMWQ 187
H T+ +L + T SRP S P AP C PH L+ WQ
Sbjct: 41 HSTSPVLGTTSTWPTTSSRPFSCSRYCPRAPTLSCHPHSLHT-WQ 84
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 30.7 bits (66), Expect = 3.2
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Frame = +3
Query: 168 YSSVAPPATLHTRGEESSPSPALREVLQIIR---EAWTEPTSLFDRW*VAGQSSVL---- 326
+ S PP TLH E ++P P Q++ A +P +L +R+ +L
Sbjct: 866 HKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKA 925
Query: 327 --TESEPLQKVALEGPHSTRTMQHAGPQYSSGTXTPPRHIRAP 449
+ P +L S Q SGT T P H AP
Sbjct: 926 GGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAP 968
>AK096917-1|BAC04894.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ39598 fis, clone SKNSH2002866. ).
Length = 129
Score = 29.9 bits (64), Expect = 5.6
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 173 GVPQHAPVSQAGVWSSAAG-GPAVRWQRTSRGNARHRSAPRALTVARRVRPDRRP 12
G P+ P ++ GV + G G R R AR R PRAL P RRP
Sbjct: 75 GNPKDVPAARKGVTGATRGRGRRESGPRKPRVGARGRRRPRALLRPLPETPPRRP 129
>BC106877-1|AAI06878.1| 663|Homo sapiens chromosome 1 open reading
frame 106 protein.
Length = 663
Score = 29.5 bits (63), Expect = 7.4
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 78 VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
V A PLPP RAAP +G LRY + P + R SPA R
Sbjct: 524 VVAESPLPPGEWELCRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 578
>AK001763-1|BAA91892.1| 663|Homo sapiens protein ( Homo sapiens
cDNA FLJ10901 fis, clone NT2RP5003524. ).
Length = 663
Score = 29.5 bits (63), Expect = 7.4
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 78 VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
V A PLPP RAAP +G LRY + P + R SPA R
Sbjct: 524 VVAESPLPPGEWELCRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 578
>AK001583-1|BAA91771.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ10721 fis, clone NT2RP3001133. ).
Length = 220
Score = 29.5 bits (63), Expect = 7.4
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 78 VAATRPLPPDRGAASRAAPYSRL-GDGRVLRYSSVAPPATLHTRGEESSPSPALR 239
V A PLPP RAAP +G LRY + P + R SPA R
Sbjct: 81 VVAESPLPPGEWELRRAAPGPAYEEEGTPLRYQRLVPSRSRIVRTPSLKDSPAGR 135
>BC041761-1|AAH41761.2| 792|Homo sapiens DOCK5 protein protein.
Length = 792
Score = 29.1 bits (62), Expect = 9.8
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +3
Query: 15 PPVGPHATRYS*SPRG*TVSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPAT 194
PP+ P ATR SP T +AAT P+PP S+ PY +G + +APP
Sbjct: 713 PPLTPKATRTLSSPSLQT-DGIAAT-PVPPPPPPKSK--PY----EGSQRNSTELAPP-- 762
Query: 195 LHTRGEESSPSP 230
L R E +P P
Sbjct: 763 LPVRREAKAPPP 774
>AK126024-1|BAC86398.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ44036 fis, clone TESTI4028809. ).
Length = 166
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 202 VCNVAGGATLEYRSTRPSPRREYGAARLAAPRSGGRGRVAA 80
VC +A ++ +R R PR +G+A + A GGRGR ++
Sbjct: 110 VC-LARDVSIPHRQGRCLPRSPWGSAGVNAALQGGRGRASS 149
>AK024687-1|BAB14962.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21034 fis, clone CAE09073. ).
Length = 274
Score = 29.1 bits (62), Expect = 9.8
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +3
Query: 15 PPVGPHATRYS*SPRG*TVSSVAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPPAT 194
PP+ P ATR SP T +AAT P+PP S+ PY +G + +APP
Sbjct: 195 PPLTPKATRTLSSPSLQT-DGIAAT-PVPPPPPPKSK--PY----EGSQRNSTELAPP-- 244
Query: 195 LHTRGEESSPSP 230
L R E +P P
Sbjct: 245 LPVRREAKAPPP 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,767,084
Number of Sequences: 237096
Number of extensions: 2336113
Number of successful extensions: 7475
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7463
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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