Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20j21
(519 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro... 30 1.6
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P... 30 1.6
BT001891-1|AAN71680.1| 561|Drosophila melanogaster SD16766p pro... 29 2.9
AY051742-1|AAK93166.1| 473|Drosophila melanogaster LD26873p pro... 29 2.9
AE014134-3580|AAF57252.1| 561|Drosophila melanogaster CG1832-PA... 29 2.9
AY060699-1|AAL28247.1| 611|Drosophila melanogaster GH14092p pro... 29 5.0
AE014134-316|AAF51325.2| 611|Drosophila melanogaster CG31670-PA... 29 5.0
AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-P... 28 6.6
BT001676-1|AAN71431.1| 566|Drosophila melanogaster RE54188p pro... 28 8.7
AE014296-865|AAF47915.2| 585|Drosophila melanogaster CG32242-PA... 28 8.7
AE014134-3581|AAX52677.1| 566|Drosophila melanogaster CG1832-PB... 28 8.7
>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 251 LKHLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAG 117
L+ +P R CM CG + G+PQ A +SQA SA G
Sbjct: 1617 LRTVPDGRWSCERCCFCMRCGATKPEGLPQVAALSQASGGPSANG 1661
>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
protein.
Length = 2006
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 251 LKHLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAG 117
L+ +P R CM CG + G+PQ A +SQA SA G
Sbjct: 1780 LRTVPDGRWSCERCCFCMRCGATKPEGLPQVAALSQASGGPSANG 1824
>BT001891-1|AAN71680.1| 561|Drosophila melanogaster SD16766p
protein.
Length = 561
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSR 84
H P ++R + +T C C V QH+ S +GV S V+ + S+
Sbjct: 305 HHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTENPSK 358
>AY051742-1|AAK93166.1| 473|Drosophila melanogaster LD26873p
protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSR 84
H P ++R + +T C C V QH+ S +GV S V+ + S+
Sbjct: 217 HHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTENPSK 270
>AE014134-3580|AAF57252.1| 561|Drosophila melanogaster CG1832-PA,
isoform A protein.
Length = 561
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSR 84
H P ++R + +T C C V QH+ S +GV S V+ + S+
Sbjct: 305 HHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTENPSK 358
>AY060699-1|AAL28247.1| 611|Drosophila melanogaster GH14092p
protein.
Length = 611
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -2
Query: 176 AGVPQHAPVSQAGVWSSAAG--GPAVRWQRTSRGNARHRSAPRALTVARRVRPDRRP 12
AG P S++ V SAA PA + Q+ +A+ R+ P ++A+ + PD RP
Sbjct: 15 AGEIAMMPPSKSPVMESAASEQNPAQQSQQQDEQSAK-RACPLKFSIAKIMEPDHRP 70
>AE014134-316|AAF51325.2| 611|Drosophila melanogaster CG31670-PA
protein.
Length = 611
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -2
Query: 176 AGVPQHAPVSQAGVWSSAAG--GPAVRWQRTSRGNARHRSAPRALTVARRVRPDRRP 12
AG P S++ V SAA PA + Q+ +A+ R+ P ++A+ + PD RP
Sbjct: 15 AGEIAMMPPSKSPVMESAASEQNPAQQSQQQDEQSAK-RACPLKFSIAKIMEPDHRP 70
>AE014134-1174|AAN10601.1| 287|Drosophila melanogaster CG17377-PC,
isoform C protein.
Length = 287
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -3
Query: 448 GARMCRGGVXVPDEYCGPACCIVRVLWGPSSATFCNGSDSV 326
G C G V CGP CC V GP S C GS S+
Sbjct: 89 GGAGCGGRVAGGCCGCGPCCCNVSPCCGPHSPPCC-GSHSL 128
>BT001676-1|AAN71431.1| 566|Drosophila melanogaster RE54188p
protein.
Length = 566
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGN 78
H P ++R + +T C C V QH+ S +GV S V+ + S N
Sbjct: 305 HHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRN 360
>AE014296-865|AAF47915.2| 585|Drosophila melanogaster CG32242-PA
protein.
Length = 585
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 363 PPALPSVMALIL*GHLTARLLTSDRTTKWARSRPRG*SEAPPAAPATDCSP 211
PPA + ++ G +A L+++RTT+W R + + P P + P
Sbjct: 417 PPATTTTNTAVVTG--SASSLSTERTTQWERDQSTSLPQPPAVYPVSSIFP 465
>AE014134-3581|AAX52677.1| 566|Drosophila melanogaster CG1832-PB,
isoform B protein.
Length = 566
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -2
Query: 245 HLPQRRRRTALLTSCM*CGRRRDAGVPQHAPVSQAGVWSSAAGGPAVRWQRTSRGN 78
H P ++R + +T C C V QH+ S +GV S V+ + S N
Sbjct: 305 HHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRN 360
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,442,594
Number of Sequences: 53049
Number of extensions: 689693
Number of successful extensions: 2539
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2539
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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