Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20j21
(519 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 31 0.009
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 3.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 4.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 5.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 5.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 5.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 5.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.6
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 30.7 bits (66), Expect = 0.009
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 366 PHSTRTMQHAGPQYSSGTXTPPRHIRAP*SIYTETLDTREGHKHLPSTPG 515
P + +QHA P YS GT + P+ + P S L ++ + PG
Sbjct: 1259 PATALMLQHAPPAYSCGTVSVPQQQQLPPSSPQPRLTVNHAYRDAVTVPG 1308
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.6 bits (46), Expect = 2.5
Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +3
Query: 15 PPVGPHATRYS*SPRG*TVSS--VAATRPLPPDRGAASRAAPYSRLGDGRVLRYSSVAPP 188
PP P R P ++ + +P PP A P + G+ R + PP
Sbjct: 25 PPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPP 84
Query: 189 ATLHTRGEESSPSP 230
R ES P
Sbjct: 85 HPRLRREAESEAEP 98
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1
Query: 87 SRQRSTPFSPEGSNCS 40
S+++ +P +P+GS CS
Sbjct: 270 SKKKLSPATPKGSKCS 285
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -3
Query: 223 GLLSSPLVCNV----AGGATLEYRSTRPSPRREYGA 128
G+ SP+ N+ +L Y +T+P + EYGA
Sbjct: 256 GMALSPMTNNLYYSPLSSRSLYYVNTKPFMKSEYGA 291
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 134
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 81 AATRPLPPDRGAASRAAPYSRLG 149
++T PP +GAA+ P R G
Sbjct: 523 SSTSSSPPAKGAAAAGQPSKRNG 545
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 352 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 382
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 337 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 367
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 373 VLGRCSMPGRSTRPGXRHRRDTFALPDLFIP 465
++ R +P R PG RH P FIP
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFPPRFIP 383
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 460 IPRHSTLERDTNICRALR 513
IP H+TLE+ +C +R
Sbjct: 442 IPVHATLEKFMILCNLMR 459
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 283 RCSIAGE*PGSQVSSQNQSHY 345
R S + P +Q +QN +HY
Sbjct: 103 RSSTSSNDPKNQYKNQNNNHY 123
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 391 MPGRSTRPGXRHRRDTFALPDLFIPRHS 474
+PG+ST +RDT D+ + R +
Sbjct: 139 LPGKSTTTTVEVKRDTINPEDVILIRRT 166
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.6
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 391 MPGRSTRPGXRHRRDTFALPDLFIPRHS 474
+PG+ST +RDT D+ + R +
Sbjct: 139 LPGKSTTTTAEVKRDTINPEDVILIRRT 166
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,428
Number of Sequences: 438
Number of extensions: 3830
Number of successful extensions: 27
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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