Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20j02
         (376 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   2.8  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   3.7  

>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 256 HRLQDQMPTQERFIASLPQNEQVYFAC 176
           H  ++QM  + R +   PQ + V+F C
Sbjct: 13  HTTREQMVQEFRKVRDNPQPKAVFFTC 39


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 112 PVIPTFLVRLALNLSILYT*GLKDY*NILKFNSHHFG 2
           P+I T L   AL LSI+++ GL +  + L+    H+G
Sbjct: 3   PLIAT-LAACALTLSIVHSRGLPESSDKLEACGQHYG 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,306
Number of Sequences: 2352
Number of extensions: 7285
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)