Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20j02
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   0.51 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   2.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   3.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   3.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   3.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   3.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   3.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   8.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   8.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 160 FLTILRREAP*RVPYLPVIP 101
           FL ++    P  VPY PVIP
Sbjct: 639 FLVVISSSNPLNVPYGPVIP 658


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 254 SLTRPDADTRTFHSILTTK*ASILCVL 174
           + TRP   T TFH IL  K A+ L VL
Sbjct: 334 TFTRPCGITLTFHEIL--KRANTLFVL 358


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 101 WNYWQIWHTL 130
           W+Y+ I+HTL
Sbjct: 172 WDYYYIYHTL 181


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 101 WNYWQIWHTL 130
           W+Y+ I+HTL
Sbjct: 187 WDYYYIYHTL 196


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 120 GTRYGASLRKMVKKMEVTQHAKYTCSFCGK 209
           G  +  S +  V     T    YTC  CGK
Sbjct: 210 GKGFTCSKQLKVHTRTHTGEKPYTCDICGK 239


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 101 WNYWQIWHTL 130
           W+Y+ I+HTL
Sbjct: 75  WDYYYIYHTL 84


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 127 RVPYLPVIPTFLV 89
           R+P LP+IP + V
Sbjct: 784 RIPILPMIPVYCV 796


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 186 YTCSFCGK 209
           YTC  CGK
Sbjct: 372 YTCDVCGK 379


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 240 RCRHKNVS*HPYHK 199
           +CR+ N S  PY+K
Sbjct: 435 QCRYPNASVTPYNK 448


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,502
Number of Sequences: 438
Number of extensions: 2473
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)