Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20i07
         (441 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA...    29   2.1  
Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger...    27   8.6  
BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p pro...    27   8.6  
AY051832-1|AAK93256.1|  484|Drosophila melanogaster LD33756p pro...    27   8.6  
AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB...    27   8.6  
AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA...    27   8.6  

>AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA
           protein.
          Length = 950

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -3

Query: 151 NTHECHKTLTPCSTHSDCNLCREGLANCQLFDEDTIVKMRGDDGQEQEK 5
           N  EC++   PCS+   C  CR  + +    D D++  + G +GQ+++K
Sbjct: 824 NYCECYEAKIPCSSICKCVGCR-NMEDRPDVDMDSLDGLMGVEGQKKDK 871


>Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger
           protein protein.
          Length = 614

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 TLTPCSTHSDCNLCREGLANC 68
           TL PC+  S CN C E +  C
Sbjct: 582 TLEPCNHLSICNTCAESVTEC 602


>BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p
           protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 TLTPCSTHSDCNLCREGLANC 68
           TL PC+  S CN C E +  C
Sbjct: 576 TLEPCNHLSICNTCAESVTEC 596


>AY051832-1|AAK93256.1|  484|Drosophila melanogaster LD33756p
           protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 TLTPCSTHSDCNLCREGLANC 68
           TL PC+  S CN C E +  C
Sbjct: 452 TLEPCNHLSICNTCAESVTEC 472


>AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB,
           isoform B protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 TLTPCSTHSDCNLCREGLANC 68
           TL PC+  S CN C E +  C
Sbjct: 567 TLEPCNHLSICNTCAESVTEC 587


>AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA,
           isoform A protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 TLTPCSTHSDCNLCREGLANC 68
           TL PC+  S CN C E +  C
Sbjct: 567 TLEPCNHLSICNTCAESVTEC 587


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,361,877
Number of Sequences: 53049
Number of extensions: 379306
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)