Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20h22
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018147-1|AAH18147.1| 666|Homo sapiens Leo1, Paf1/RNA polymera... 37 0.043
AY302186-1|AAP68819.1| 666|Homo sapiens replicative senescence ... 37 0.043
AK055762-1|BAB71006.1| 425|Homo sapiens protein ( Homo sapiens ... 37 0.043
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 33 0.94
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 33 0.94
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 33 0.94
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 33 0.94
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 33 0.94
Z69304-1|CAI42009.1| 638|Homo sapiens zinc finger, matrin type ... 32 1.6
Z68868-2|CAI42751.1| 638|Homo sapiens zinc finger, matrin type ... 32 1.6
U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55 pro... 32 1.6
BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein. 32 1.6
BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein. 32 1.6
AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding prote... 32 1.6
AB058692-1|BAB47418.1| 477|Homo sapiens KIAA1789 protein protein. 32 1.6
AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein. 32 1.6
X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID ... 31 2.2
BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,... 31 2.2
AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55 p... 31 2.2
BC001653-1|AAH01653.1| 600|Homo sapiens melanophilin protein. 31 2.9
AC104667-1|AAY24045.1| 261|Homo sapiens unknown protein. 31 2.9
D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein. 31 3.8
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 31 3.8
AK096373-1|BAC04770.1| 204|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 31 3.8
U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein. 30 5.0
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 30 5.0
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 30 5.0
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 30 5.0
BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific pept... 30 5.0
BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific pept... 30 5.0
BC003380-1|AAH03380.1| 268|Homo sapiens acidic (leucine-rich) n... 30 5.0
AL138795-4|CAI22808.1| 268|Homo sapiens acidic (leucine-rich) n... 30 5.0
AL138795-3|CAI22809.1| 136|Homo sapiens acidic (leucine-rich) n... 30 5.0
AL138795-1|CAI22806.1| 220|Homo sapiens acidic (leucine-rich) n... 30 5.0
AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific prot... 30 5.0
AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific prot... 30 5.0
AK126129-1|BAC86454.1| 347|Homo sapiens protein ( Homo sapiens ... 30 5.0
AK092672-1|BAC03942.1| 268|Homo sapiens mRNA. protein. 30 5.0
AK021765-1|BAB13890.1| 347|Homo sapiens protein ( Homo sapiens ... 30 5.0
AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein. 30 5.0
AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein. 30 5.0
AC019140-1|AAY24139.1| 585|Homo sapiens unknown protein. 30 5.0
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 30 5.0
AB063300-1|BAB79449.1| 585|Homo sapiens TGF-beta induced apotos... 30 5.0
S42457-1|AAB22778.1| 686|Homo sapiens rod photoreceptor cGMP-ga... 30 6.6
M30627-1|AAA36024.1| 312|Homo sapiens heat shock protein 86 pro... 30 6.6
M84741-1|AAA52010.1| 690|Homo sapiens cGMP-gated cation channel... 29 8.7
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 29 8.7
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 29 8.7
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 29 8.7
AC107068-3|AAY40919.1| 690|Homo sapiens unknown protein. 29 8.7
>BC018147-1|AAH18147.1| 666|Homo sapiens Leo1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 666
Score = 37.1 bits (82), Expect = 0.043
Identities = 26/105 (24%), Positives = 44/105 (41%)
Frame = +1
Query: 172 NKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKD 351
++K+G K+ DD N D+ E+ E+ Q D E+ D E + D++
Sbjct: 142 DEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDER 201
Query: 352 KGYIEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNS 486
+ E + S E V + + D + PQ S+E+ NS
Sbjct: 202 QQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNS 246
>AY302186-1|AAP68819.1| 666|Homo sapiens replicative senescence
downregulated leo1-like protein protein.
Length = 666
Score = 37.1 bits (82), Expect = 0.043
Identities = 26/105 (24%), Positives = 44/105 (41%)
Frame = +1
Query: 172 NKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKD 351
++K+G K+ DD N D+ E+ E+ Q D E+ D E + D++
Sbjct: 142 DEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDER 201
Query: 352 KGYIEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNS 486
+ E + S E V + + D + PQ S+E+ NS
Sbjct: 202 QQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNS 246
>AK055762-1|BAB71006.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ31200 fis, clone KIDNE2000574, weakly similar to
Staphylococcus epidermidis putative cell-surface adhesin
SdrF ).
Length = 425
Score = 37.1 bits (82), Expect = 0.043
Identities = 26/105 (24%), Positives = 44/105 (41%)
Frame = +1
Query: 172 NKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKD 351
++K+G K+ DD N D+ E+ E+ Q D E+ D E + D++
Sbjct: 142 DEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDER 201
Query: 352 KGYIEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNS 486
+ E + S E V + + D + PQ S+E+ NS
Sbjct: 202 QQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNS 246
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.7 bits (71), Expect = 0.94
Identities = 16/86 (18%), Positives = 44/86 (51%)
Frame = +1
Query: 232 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFER 411
L E +++Q V+ + +T + EH +E+ ++K E + + +L + S++
Sbjct: 659 LKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSL 718
Query: 412 TMKVQDSCDAADMPQDSEEQVEDNSV 489
+ QD+C+ + + + ++++ +V
Sbjct: 719 KLMEQDTCNLEEEERKASTKIKEINV 744
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 32.7 bits (71), Expect = 0.94
Identities = 16/86 (18%), Positives = 44/86 (51%)
Frame = +1
Query: 232 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFER 411
L E +++Q V+ + +T + EH +E+ ++K E + + +L + S++
Sbjct: 659 LKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSL 718
Query: 412 TMKVQDSCDAADMPQDSEEQVEDNSV 489
+ QD+C+ + + + ++++ +V
Sbjct: 719 KLMEQDTCNLEEEERKASTKIKEINV 744
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.7 bits (71), Expect = 0.94
Identities = 16/86 (18%), Positives = 44/86 (51%)
Frame = +1
Query: 232 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFER 411
L E +++Q V+ + +T + EH +E+ ++K E + + +L + S++
Sbjct: 659 LKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSL 718
Query: 412 TMKVQDSCDAADMPQDSEEQVEDNSV 489
+ QD+C+ + + + ++++ +V
Sbjct: 719 KLMEQDTCNLEEEERKASTKIKEINV 744
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 32.7 bits (71), Expect = 0.94
Identities = 16/86 (18%), Positives = 44/86 (51%)
Frame = +1
Query: 232 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFER 411
L E +++Q V+ + +T + EH +E+ ++K E + + +L + S++
Sbjct: 659 LKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSL 718
Query: 412 TMKVQDSCDAADMPQDSEEQVEDNSV 489
+ QD+C+ + + + ++++ +V
Sbjct: 719 KLMEQDTCNLEEEERKASTKIKEINV 744
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 32.7 bits (71), Expect = 0.94
Identities = 16/86 (18%), Positives = 44/86 (51%)
Frame = +1
Query: 232 LDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFER 411
L E +++Q V+ + +T + EH +E+ ++K E + + +L + S++
Sbjct: 678 LKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSL 737
Query: 412 TMKVQDSCDAADMPQDSEEQVEDNSV 489
+ QD+C+ + + + ++++ +V
Sbjct: 738 KLMEQDTCNLEEEERKASTKIKEINV 763
>Z69304-1|CAI42009.1| 638|Homo sapiens zinc finger, matrin type 1
protein.
Length = 638
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 160 RPPRNKKYGTGKKTYFDDD-GNALNLDEYEKQMQHVEECTQTISDTERKSEHD-PSEVIE 333
RP + + KK+Y D D ++ + +++ V+ + + ++K HD PSE E
Sbjct: 551 RPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEE 610
Query: 334 RKDEKDK 354
RK K+K
Sbjct: 611 RKHRKEK 617
>Z68868-2|CAI42751.1| 638|Homo sapiens zinc finger, matrin type 1
protein.
Length = 638
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 160 RPPRNKKYGTGKKTYFDDD-GNALNLDEYEKQMQHVEECTQTISDTERKSEHD-PSEVIE 333
RP + + KK+Y D D ++ + +++ V+ + + ++K HD PSE E
Sbjct: 551 RPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEE 610
Query: 334 RKDEKDK 354
RK K+K
Sbjct: 611 RKHRKEK 617
>U18062-1|AAB60347.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERTM 417
E E + QH +E I DTE E + + DE+ + ++L +++++
Sbjct: 231 EDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQNQIDNMKG 290
Query: 418 KVQDSCDAADMPQDSEEQVED 480
K+Q++ D A +D +VE+
Sbjct: 291 KLQETQDRAKRQEDLIMKVEN 311
>BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.
Length = 1506
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
Y G++ +D+ ++ E++ Q E+ + DT+ E D +++E + E+D
Sbjct: 1386 YEVGRQRLAEDEDEE---EDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNN 1442
Query: 361 IEGSELGSHVESRVFERTMK-VQDSCDAADMPQDSEEQVE 477
E G + S E +++ D D D++E+VE
Sbjct: 1443 ENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVE 1482
>BC022792-1|AAH22792.1| 1058|Homo sapiens VPRBP protein protein.
Length = 1058
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
Y G++ +D+ ++ E++ Q E+ + DT+ E D +++E + E+D
Sbjct: 938 YEVGRQRLAEDEDEE---EDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNN 994
Query: 361 IEGSELGSHVESRVFERTMK-VQDSCDAADMPQDSEEQVE 477
E G + S E +++ D D D++E+VE
Sbjct: 995 ENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVE 1034
>AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding protein
protein.
Length = 1401
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
Y G++ +D+ ++ E++ Q E+ + DT+ E D +++E + E+D
Sbjct: 1281 YEVGRQRLAEDEDEE---EDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNN 1337
Query: 361 IEGSELGSHVESRVFERTMK-VQDSCDAADMPQDSEEQVE 477
E G + S E +++ D D D++E+VE
Sbjct: 1338 ENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVE 1377
>AB058692-1|BAB47418.1| 477|Homo sapiens KIAA1789 protein protein.
Length = 477
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 160 RPPRNKKYGTGKKTYFDDD-GNALNLDEYEKQMQHVEECTQTISDTERKSEHD-PSEVIE 333
RP + + KK+Y D D ++ + +++ V+ + + ++K HD PSE E
Sbjct: 390 RPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEE 449
Query: 334 RKDEKDK 354
RK K+K
Sbjct: 450 RKHRKEK 456
>AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.
Length = 1521
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
Y G++ +D+ ++ E++ Q E+ + DT+ E D +++E + E+D
Sbjct: 1401 YEVGRQRLAEDEDEE---EDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNN 1457
Query: 361 IEGSELGSHVESRVFERTMK-VQDSCDAADMPQDSEEQVE 477
E G + S E +++ D D D++E+VE
Sbjct: 1458 ENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVE 1497
>X97999-1|CAA66636.1| 349|Homo sapiens transcription factor IID
protein.
Length = 349
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERTM 417
E E + QH +E I DTE E + + DE+ + ++L ++ ++
Sbjct: 231 EDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKG 290
Query: 418 KVQDSCDAADMPQDSEEQVED 480
K+Q++ D A +D +VE+
Sbjct: 291 KLQETQDRAKRQEDLIMKVEN 311
>BC032737-1|AAH32737.1| 349|Homo sapiens TAF7 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 55kDa
protein.
Length = 349
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERTM 417
E E + QH +E I DTE E + + DE+ + ++L ++ ++
Sbjct: 231 EDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKG 290
Query: 418 KVQDSCDAADMPQDSEEQVED 480
K+Q++ D A +D +VE+
Sbjct: 291 KLQETQDRAKRQEDLIMKVEN 311
>AF349038-1|AAK30585.1| 349|Homo sapiens TFIID subunit TAFII55
protein.
Length = 349
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERTM 417
E E + QH +E I DTE E + + DE+ + ++L ++ ++
Sbjct: 231 EDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKG 290
Query: 418 KVQDSCDAADMPQDSEEQVED 480
K+Q++ D A +D +VE+
Sbjct: 291 KLQETQDRAKRQEDLIMKVEN 311
>BC001653-1|AAH01653.1| 600|Homo sapiens melanophilin protein.
Length = 600
Score = 31.1 bits (67), Expect = 2.9
Identities = 30/115 (26%), Positives = 49/115 (42%)
Frame = +1
Query: 163 PPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKD 342
PP K G G +T D + AL + +EE T +SD E SE + ++ + +
Sbjct: 364 PPLAKGLGAGVRTEADVEEEALR--------RKLEELTSNVSDQETSSEEEEAKDEKAEP 415
Query: 343 EKDKGYIEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNSVTQQETS 507
+DK + V + +T + + S PQD + V+ N T +E S
Sbjct: 416 NRDKSVGPLPQADPEVGTAA-HQTNRQEKS------PQDPGDPVQYNRTTDEELS 463
>AC104667-1|AAY24045.1| 261|Homo sapiens unknown protein.
Length = 261
Score = 31.1 bits (67), Expect = 2.9
Identities = 30/115 (26%), Positives = 49/115 (42%)
Frame = +1
Query: 163 PPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKD 342
PP K G G +T D + AL + +EE T +SD E SE + ++ + +
Sbjct: 25 PPLAKGLGAGVRTEADVEEEALR--------RKLEELTSNVSDQETSSEEEEAKDEKAEP 76
Query: 343 EKDKGYIEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNSVTQQETS 507
+DK + V + +T + + S PQD + V+ N T +E S
Sbjct: 77 NRDKSVGPLPQADPEVGTAA-HQTNRQEKS------PQDPGDPVQYNRTTDEELS 124
>D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein.
Length = 558
Score = 30.7 bits (66), Expect = 3.8
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSEHDPSEVIERKD-EKDKGYIEGSELGSHVESRVFERT 414
E ++ +EE T+T++ + +K++ +E +++D EK++ E + GS E++ E+
Sbjct: 148 ESRQERYEIEE-TETVTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQGEEKG 206
Query: 415 MKVQDSCD--AADMPQDSEEQVEDNSVTQQE 501
KVQ + D P +E+++D + + +
Sbjct: 207 TKVQAKREKLQEDKPTFKKEEIKDEKIKKDK 237
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +1
Query: 94 FCLNAEKLLTGHMVYRKRLARLRP-PRNKKYGTGKKTYFDDDGNALNLD-EYEKQMQHVE 267
FC ++L+ + K++ R+ PR + + + Y++ + E +++MQ V
Sbjct: 298 FCQRYDQLMEA---WEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQRVG 354
Query: 268 ECTQTISDTERKSEHDPSEVIERKDEKD 351
+ +S + +SEH+ SE+I+ E++
Sbjct: 355 QRGSGLSMSPARSEHEVSEIIDGLSEQE 382
>AK096373-1|BAC04770.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ39054 fis, clone NT2RP7012516. ).
Length = 204
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -1
Query: 449 ISAASHESCTFIVRSKTLLSTWLPSSEPSIYPLSFSSFRSITSEGSCSLFLS 294
+S +S S +F +LLS +LPS PS P SF S LFLS
Sbjct: 52 LSLSSFFSSSFSFSFSSLLSLFLPSFFPSFLPSFLPSFPPSLPPSSLFLFLS 103
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended
isofo protein.
Length = 2507
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +1
Query: 94 FCLNAEKLLTGHMVYRKRLARLRP-PRNKKYGTGKKTYFDDDGNALNLD-EYEKQMQHVE 267
FC ++L+ + K++ R+ PR + + + Y++ + E +++MQ V
Sbjct: 298 FCQRYDQLMEA---WEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQRVG 354
Query: 268 ECTQTISDTERKSEHDPSEVIERKDEKD 351
+ +S + +SEH+ SE+I+ E++
Sbjct: 355 QRGSGLSMSPARSEHEVSEIIDGLSEQE 382
>U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein.
Length = 963
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 659 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 696
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 RKRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVE---ECTQTISDTERKSE 309
RK++AR NKK + + N + +D+Y ++ + + C + + E + E
Sbjct: 794 RKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEE 853
Query: 310 HDPSEV 327
D EV
Sbjct: 854 EDEPEV 859
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 RKRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVE---ECTQTISDTERKSE 309
RK++AR NKK + + N + +D+Y ++ + + C + + E + E
Sbjct: 774 RKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEE 833
Query: 310 HDPSEV 327
D EV
Sbjct: 834 EDEPEV 839
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 RKRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVE---ECTQTISDTERKSE 309
RK++AR NKK + + N + +D+Y ++ + + C + + E + E
Sbjct: 785 RKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEE 844
Query: 310 HDPSEV 327
D EV
Sbjct: 845 EDEPEV 850
>BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 659 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 696
>BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 659 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 696
>BC003380-1|AAH03380.1| 268|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member E protein.
Length = 268
Score = 30.3 bits (65), Expect = 5.0
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 DEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERT 414
D+ + EE E E + E E +DE + GSELG E
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYL 221
Query: 415 MK--VQDSCDAADMPQDSEEQVED 480
MK +QD D D ++ EE+ E+
Sbjct: 222 MKEEIQDEEDDDDYVEEGEEEEEE 245
>AL138795-4|CAI22808.1| 268|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member E protein.
Length = 268
Score = 30.3 bits (65), Expect = 5.0
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 DEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERT 414
D+ + EE E E + E E +DE + GSELG E
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYL 221
Query: 415 MK--VQDSCDAADMPQDSEEQVED 480
MK +QD D D ++ EE+ E+
Sbjct: 222 MKEEIQDEEDDDDYVEEGEEEEEE 245
>AL138795-3|CAI22809.1| 136|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member E protein.
Length = 136
Score = 30.3 bits (65), Expect = 5.0
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 DEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERT 414
D+ + EE E E + E E +DE + GSELG E
Sbjct: 30 DDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYL 89
Query: 415 MK--VQDSCDAADMPQDSEEQVED 480
MK +QD D D ++ EE+ E+
Sbjct: 90 MKEEIQDEEDDDDYVEEGEEEEEE 113
>AL138795-1|CAI22806.1| 220|Homo sapiens acidic (leucine-rich)
nuclear phosphoprotein 32 family, member E protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.0
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 DEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERT 414
D+ + EE E E + E E +DE + GSELG E
Sbjct: 114 DDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYL 173
Query: 415 MK--VQDSCDAADMPQDSEEQVED 480
MK +QD D D ++ EE+ E+
Sbjct: 174 MKEEIQDEEDDDDYVEEGEEEEEE 197
>AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform a variant protein.
Length = 963
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 659 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 696
>AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform b variant protein.
Length = 916
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 612 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 649
>AK126129-1|BAC86454.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ44141 fis, clone THYMU2016204. ).
Length = 347
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 286 SDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVE 393
SD E + E + E + D+K G++EG LG+H E
Sbjct: 201 SDEEEEEEEEEEEEEDDDDDKGDGFVEG--LGTHAE 234
>AK092672-1|BAC03942.1| 268|Homo sapiens mRNA. protein.
Length = 268
Score = 30.3 bits (65), Expect = 5.0
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 DEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVESRVFERT 414
D+ + EE E E + E E +DE + GSELG E
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYL 221
Query: 415 MK--VQDSCDAADMPQDSEEQVED 480
MK +QD D D ++ EE+ E+
Sbjct: 222 MKEEIQDEEDDDDYVEEGEEEEEE 245
>AK021765-1|BAB13890.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ11703 fis, clone HEMBA1005075. ).
Length = 347
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 286 SDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVE 393
SD E + E + E + D+K G++EG LG+H E
Sbjct: 131 SDEEEEEEEEEEEEEDDDDDKGDGFVEG--LGTHAE 164
>AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein.
Length = 916
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 612 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 649
>AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein.
Length = 963
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 238 EYEKQMQHVEECTQTISDTERKSE----HDPSEVIERK 339
E E++M+H EE + +S+TE E +DPSE ++K
Sbjct: 659 EDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKK 696
>AC019140-1|AAY24139.1| 585|Homo sapiens unknown protein.
Length = 585
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 286 SDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVE 393
SD E + E + E + D+K G++EG LG+H E
Sbjct: 369 SDEEEEEEEEEEEEEDDDDDKGDGFVEG--LGTHAE 402
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 RKRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVE---ECTQTISDTERKSE 309
RK++AR NKK + + N + +D+Y ++ + + C + + E + E
Sbjct: 467 RKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEE 526
Query: 310 HDPSEV 327
D EV
Sbjct: 527 EDEPEV 532
>AB063300-1|BAB79449.1| 585|Homo sapiens TGF-beta induced apotosis
protein 2 protein.
Length = 585
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 286 SDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVE 393
SD E + E + E + D+K G++EG LG+H E
Sbjct: 369 SDEEEEEEEEEEEEEDDDDDKGDGFVEG--LGTHAE 402
>S42457-1|AAB22778.1| 686|Homo sapiens rod photoreceptor cGMP-gated
channel protein.
Length = 686
Score = 29.9 bits (64), Expect = 6.6
Identities = 18/78 (23%), Positives = 44/78 (56%)
Frame = +1
Query: 142 KRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPS 321
K L + P + ++Y G F+ + N+ N D+ ++ + ++ ++ SD + ++++DP
Sbjct: 65 KSLRKGGPSQREQYLPGAIALFNVN-NSSNKDQEPEEKKKKKKEKKSKSDNKNENKNDPE 123
Query: 322 EVIERKDEKDKGYIEGSE 375
+ ++KD++ K E S+
Sbjct: 124 KKKKKKDKEKKKKEEKSK 141
>M30627-1|AAA36024.1| 312|Homo sapiens heat shock protein 86
protein.
Length = 312
Score = 29.9 bits (64), Expect = 6.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 265 EECTQTISDTERKSEHDPSEVIERKDEKDKGYIEGSELGSHVE 393
+EC + +SD E + + D E E+++++ K E ++GS E
Sbjct: 224 KECDKEVSDDEAEEKEDKEEEKEKEEKESKDKPEIEDVGSDEE 266
>M84741-1|AAA52010.1| 690|Homo sapiens cGMP-gated cation channel
protein protein.
Length = 690
Score = 29.5 bits (63), Expect = 8.7
Identities = 18/78 (23%), Positives = 44/78 (56%)
Frame = +1
Query: 142 KRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPS 321
K L + P + ++Y G F+ + N+ N D+ ++ + ++ ++ SD + ++++DP
Sbjct: 69 KSLRKGGPSQREQYLPGAIAIFNVN-NSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPE 127
Query: 322 EVIERKDEKDKGYIEGSE 375
+ ++KD++ K E S+
Sbjct: 128 KKKKKKDKEKKKKEEKSK 145
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 29.5 bits (63), Expect = 8.7
Identities = 21/109 (19%), Positives = 46/109 (42%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
+ K Y D + +E + +H E + + E E + + + DE+D +
Sbjct: 188 WAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVF 247
Query: 361 IEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNSVTQQETS 507
+ E ++ES+V + +++Q P S + E++S ++ S
Sbjct: 248 DDEDEEEENIESKV-TKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDS 295
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 29.5 bits (63), Expect = 8.7
Identities = 21/109 (19%), Positives = 46/109 (42%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
+ K Y D + +E + +H E + + E E + + + DE+D +
Sbjct: 188 WAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVF 247
Query: 361 IEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNSVTQQETS 507
+ E ++ES+V + +++Q P S + E++S ++ S
Sbjct: 248 DDEDEEEENIESKV-TKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDS 295
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 29.5 bits (63), Expect = 8.7
Identities = 21/109 (19%), Positives = 46/109 (42%)
Frame = +1
Query: 181 YGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPSEVIERKDEKDKGY 360
+ K Y D + +E + +H E + + E E + + + DE+D +
Sbjct: 188 WAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVF 247
Query: 361 IEGSELGSHVESRVFERTMKVQDSCDAADMPQDSEEQVEDNSVTQQETS 507
+ E ++ES+V + +++Q P S + E++S ++ S
Sbjct: 248 DDEDEEEENIESKV-TKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDS 295
>AC107068-3|AAY40919.1| 690|Homo sapiens unknown protein.
Length = 690
Score = 29.5 bits (63), Expect = 8.7
Identities = 18/78 (23%), Positives = 44/78 (56%)
Frame = +1
Query: 142 KRLARLRPPRNKKYGTGKKTYFDDDGNALNLDEYEKQMQHVEECTQTISDTERKSEHDPS 321
K L + P + ++Y G F+ + N+ N D+ ++ + ++ ++ SD + ++++DP
Sbjct: 69 KSLRKGGPSQREQYLPGAIALFNVN-NSSNKDQEPEEKKKKKKEKKSKSDDKNENKNDPE 127
Query: 322 EVIERKDEKDKGYIEGSE 375
+ ++KD++ K E S+
Sbjct: 128 KKKKKKDKEKKKKEEKSK 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.127 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,312,661
Number of Sequences: 237096
Number of extensions: 1461115
Number of successful extensions: 4864
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4855
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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