Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20h11
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF125460-2|AAD12846.1| 151|Caenorhabditis elegans Hypothetical ... 32 0.47
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 31 0.62
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 1.4
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 30 1.9
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 28 5.8
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSGR 612
G W GNG GN G G G G G G GR
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGR 111
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -3
Query: 710 GRWSGNG----WSGNVCSGNGWSGRFYGCSGNGWSG 615
G W NG W GN GNG GR G G G G
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSGR 612
G G GW N GN W G G GNG GR
Sbjct: 65 GGGRGGGWGNNGGGGN-WGGN--GGGGNGGGGR 94
>AF125460-2|AAD12846.1| 151|Caenorhabditis elegans Hypothetical
protein Y9D1A.2 protein.
Length = 151
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 704 WSGNGWSGNVCSGNGWSGRFYGCSGNGWSG 615
W G+GW G G+GW G G+GW G
Sbjct: 3 WDGSGWIGMDRDGSGWIG--MDRDGSGWIG 30
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 698 GNGWSGNVCSGNGWSGRFYGCSGNGWSG 615
G+GW G G+GW G + G GW G
Sbjct: 25 GSGWIGTDRDGSGWMGTDW--DGLGWIG 50
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = -3
Query: 713 HGRWSGNG---WSGN-VCSGNGWSGRFYGCSGNGWSG 615
+G W GNG W N G+ W G G G GW G
Sbjct: 690 NGGWGGNGGGGWGNNDPWGGSRWGGGRGGWGGGGWGG 726
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNG-WSGRFYGCSGNGWSG 615
G W GNG G G G W G G GN W G
Sbjct: 86 GDWGGNGGGGRGGGGRGDWGGNNNGGGGN-WGG 117
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGW 621
GRW G W GN G G G + G GW
Sbjct: 30 GRWGG--WGGNRWGGGGGPGGWGNNGGGGW 57
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Frame = -3
Query: 710 GRWSGNG-----WSGNVCSGNGWSGR-FYGCSGNGWSGRF 609
G W GNG W GN G G GR +G + NG G +
Sbjct: 76 GNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNW 115
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = -3
Query: 707 RWSGNGWSGNVCSGNGWSGRFYGCSG--NGW 621
+W GW G GW G +G G GW
Sbjct: 19 QWGPGGWGGGPGRWGGWGGNRWGGGGGPGGW 49
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 474 KLSWARCTPAWARYMCCQN---RTRCGCRTETMDVEMAMAVKSSPKAR*KTKVFL 319
K++ R + A RY C N +T CG V + AV PKA + K+FL
Sbjct: 357 KVALRRDSVATKRYCLCYNIQLQTNCGIELVGKKVSLPFAVLVGPKADVEAKLFL 411
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 474 KLSWARCTPAWARYMCCQN---RTRCGCRTETMDVEMAMAVKSSPKAR*KTKVFL 319
K++ R + A RY C N +T CG V + AV PKA + K+FL
Sbjct: 357 KVALRRDSVATKRYCLCYNIQLQTNCGIELVGKKVSLPFAVLVGPKADVEAKLFL 411
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 474 KLSWARCTPAWARYMCCQN---RTRCGCRTETMDVEMAMAVKSSPKAR*KTKVFL 319
K++ R + A RY C N +T CG V + AV PKA + K+FL
Sbjct: 403 KVALRRDSVATKRYCLCYNIQLQTNCGIELVGKKVSLPFAVLVGPKADVEAKLFL 457
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNG 624
G W+ G G NGW+ G +GNG
Sbjct: 43 GEWNNGGGRGGFGGNNGWNNGGGGFNGNG 71
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNGWSG 615
G G G G+ GW G+ G S GW G
Sbjct: 76 GGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGG 107
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3
Query: 710 GRWSGNGWSGNVCSGNGWSGRFYGCSGNG 624
G +GN SGN SGNG +G G SGNG
Sbjct: 227 GSGNGNSNSGNGNSGNG-NGNNAGNSGNG 254
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +1
Query: 409 TSSILATHIACPSRCTTCPRKFCVPHRTRAQCASLRCRTKKSLVGARQRFR-PNC 570
TSS L A +C C RKF R + CR +S V +FR NC
Sbjct: 15 TSSTLDQDSAKVPQCQVCKRKFANQKTLRTHMKHITCRPGRSNV-VNHKFRCENC 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,617,079
Number of Sequences: 27780
Number of extensions: 235304
Number of successful extensions: 1008
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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