Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20h09
         (164 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    21   5.4  
EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     20   9.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     20   9.4  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 35  FYLSGTAARNNTFARNSTN 91
           +Y+ G +  NN F+ +++N
Sbjct: 206 YYIQGLSEENNVFSISTSN 224


>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 71  FARNSTNLTCIYCVTEYFKIIFTNSKKRK 157
           F+   T + C+YC+  +     TNS  ++
Sbjct: 16  FSPVETGVKCLYCLKVFKYTKGTNSNLKR 44


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 38  YLSGTAARNNTFARNS 85
           YL    A  NTF RNS
Sbjct: 543 YLVDFTAGKNTFVRNS 558


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,510
Number of Sequences: 2352
Number of extensions: 2175
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 33
effective length of database: 486,363
effective search space used: 10213623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)