Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20h07
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.            30   8.2  

>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
          Length = 2911

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
 Frame = -1

Query: 634  SAGTQNDAVECHDVVECHDLVECHDLVECHDWVECHDLVECH-DVVECHDVVECHDVLGC 458
            S G   D   C DV EC + +   +  +C + V      EC        D   C D+  C
Sbjct: 1436 SEGFTGDGFTCSDVDECAENINLCENGQCLN-VPGAYRCECEMGFTPASDSRSCQDIDEC 1494

Query: 457  SYMVECHDWVECHDV-----VECHDL*ERHDVLG-CRDMVECHDVVGCHD--VVGCHDMI 302
            S+   C     C+++       C D  E     G C D+ EC D + C +   V      
Sbjct: 1495 SFQNICVSGT-CNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINCVNGLCVNTPGRY 1553

Query: 301  ECN 293
            ECN
Sbjct: 1554 ECN 1556


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.125    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,934,928
Number of Sequences: 237096
Number of extensions: 1272806
Number of successful extensions: 2515
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)