Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20g24
         (161 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118426-1|AAM48455.1|  176|Drosophila melanogaster RH14320p pro...    27   4.7  
AE013599-1487|AAF58510.2|  246|Drosophila melanogaster CG13154-P...    27   4.7  

>AY118426-1|AAM48455.1|  176|Drosophila melanogaster RH14320p
           protein.
          Length = 176

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 110 QLISHHYYAFKPKETLKRQNKTNHTASL 27
           Q   H+YYA KPK+  K+ N  N   +L
Sbjct: 55  QKTEHNYYAEKPKKKPKKFNAANKHINL 82


>AE013599-1487|AAF58510.2|  246|Drosophila melanogaster CG13154-PA
           protein.
          Length = 246

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 110 QLISHHYYAFKPKETLKRQNKTNHTASL 27
           Q   H+YYA KPK+  K+ N  N   +L
Sbjct: 125 QKTEHNYYAEKPKKKPKKFNAANKHINL 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,648,046
Number of Sequences: 53049
Number of extensions: 87816
Number of successful extensions: 127
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 24,988,368
effective HSP length: 34
effective length of database: 23,184,702
effective search space used: 440509338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)