Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20g16
(584 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 26 0.31
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 26 0.31
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 26 0.31
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 6.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 6.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.9
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 8.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 8.9
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.31
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 36 FYGLPVGHARRLPQAAKMGAYRY 104
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.31
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 36 FYGLPVGHARRLPQAAKMGAYRY 104
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.31
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 36 FYGLPVGHARRLPQAAKMGAYRY 104
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 40 TVYLWDTRDVCHRLLRW 90
T+Y +D RD C +W
Sbjct: 402 TIYKYDVRDGCRTPFQW 418
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 5.1
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 67 VCHRLLRWVPTDI 105
VCH + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 237 VFGLCPALWAWERGAYESTD 178
+ +C LW W R Y T+
Sbjct: 51 ILPVCNGLWRWIRLTYGQTN 70
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 237 VFGLCPALWAWERGAYESTD 178
+ +C LW W R Y T+
Sbjct: 89 ILPVCNGLWRWIRLTYGQTN 108
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +2
Query: 428 CVELLLG----CTRFFIQVFRGYP 487
C+ LL+G C +F + + +G+P
Sbjct: 284 CMMLLIGHWSGCLQFLVPMLQGFP 307
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/34 (23%), Positives = 13/34 (38%)
Frame = +2
Query: 140 YAFFVACEGMAVPSVDSYAPRSQAHKAGQSPKTR 241
Y + + P+ P H+A + KTR
Sbjct: 1213 YTVYTKADNAEEPTSQKVPPNQLTHEASELDKTR 1246
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 231 GLCPALWAWERGAY 190
GLCP++ ++RG +
Sbjct: 357 GLCPSMANYDRGVF 370
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +2
Query: 428 CVELLLG----CTRFFIQVFRGYP 487
C+ LL+G C +F + + +G+P
Sbjct: 252 CMMLLIGHWSGCLQFLVPMLQGFP 275
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 231 GLCPALWAWERGAY 190
GLCP++ ++RG +
Sbjct: 447 GLCPSMANYDRGVF 460
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,975
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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