Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20f22
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 35 7e-04
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 29 0.033
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 29 0.044
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 28 0.077
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 28 0.077
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 28 0.077
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 27 0.13
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 27 0.13
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 27 0.13
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 25 0.72
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 24 0.95
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 1.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 1.7
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.7
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 22 3.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.1
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.1
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.1
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 6.7
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 34.7 bits (76), Expect = 7e-04
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRY-YQYNNNCNFIYINV 379
++S LS+K + N Y Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNCKKLYYNI 111
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 29.1 bits (62), Expect = 0.033
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNNCNFIYINVVK*KPILLYIMFY 340
++S LS+K + N Y YNN + IN ++ P+ + + Y
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPVPVPVPIY 345
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 28.7 bits (61), Expect = 0.044
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYY------QYNNNCNFIY--INVVK*KPILLYIMFYC 337
++S LS++ + N Y YNNNC +Y IN ++ P+ + + YC
Sbjct: 81 IISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPVPVPVPIYC 132
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 27.9 bits (59), Expect = 0.077
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINVVK*KPILLYIMFYC 337
S+ Y YNNN +Y N++ + I + + YC
Sbjct: 319 SNNYNYNNYNNNYKPLYYNIINIEQIPVPVPIYC 352
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.9 bits (59), Expect = 0.077
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNNCNFIYINVVK*KPILLYIMFYC 337
++S LS+K + N Y YN +Y N++ + I + + YC
Sbjct: 314 IISSLSNKTIHNNNNYKNYNKK---LYYNIINIEQIPVPVPVYC 354
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.077
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINVVK*K--PILLYIMFYC 337
++ N YNNNC +Y N++ + P+ + + YC
Sbjct: 339 NNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIYC 374
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.13
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 379
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.13
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 379
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.13
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 379
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 24.6 bits (51), Expect = 0.72
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 458 CDTTQKQNKLANFFKKPFTSFTLQQVNN 541
CD +K+N+ F K+P T VNN
Sbjct: 12 CDLLKKRNENDPFLKRPITGDEKWVVNN 39
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 24.2 bits (50), Expect = 0.95
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 211 LDEMLTKKLIESNAMVFDETNKNLKFIHNSISICLNRCI 327
LDE KLIE + VF N+ ++ I + +I L + +
Sbjct: 189 LDEDTKNKLIEESKTVFILNNEIIRSIQGTGTIILKKTV 227
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = -1
Query: 429 NRYYQYNNNCN-----FIYINVVK*KPILLYIMFYC 337
N Y YNNN N Y N++ + I + + YC
Sbjct: 96 NNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYC 131
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 468 VVSHLSDKDDSDGNRYYQYNNN 403
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Frame = -1
Query: 429 NRYYQYNNNCNFIY------INVVK*KPILLYIMFYC 337
N Y YNNN N Y IN ++ P+ + + YC
Sbjct: 335 NNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVPIYC 371
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 516 VLLCSRLIIFLSYNAIIINSL 578
V++ S LII +SY I+ N L
Sbjct: 18 VVIVSSLIILISYALILFNIL 38
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 438 SDGNRYYQYNNNCNFIYINV 379
S+ Y YNNN +Y N+
Sbjct: 308 SNNYNYNNYNNNYKPLYYNI 327
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 229 LLAFHLKNQTVCPARLRILWCNRACRC 149
L + LK++ P I CN+ C C
Sbjct: 454 LCPYTLKHKIRVPPGTPIYECNKRCNC 480
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 276 KFKIYSQQHQHMFKSLYKFNYNKTLCTIIWV 368
+FK+ + + M SL NY++ C I +V
Sbjct: 187 QFKVLGHRQRAMEISLTTGNYSRLACEIQFV 217
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 276 KFKIYSQQHQHMFKSLYKFNYNKTLCTIIWV 368
+FK+ + + M SL NY++ C I +V
Sbjct: 126 QFKVLGHRQRAMEISLTTGNYSRLACEIQFV 156
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,996
Number of Sequences: 438
Number of extensions: 2848
Number of successful extensions: 33
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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