Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20f06
         (439 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   3e-05
UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Cion...    34   1.5  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   2.0  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   2.0  
UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein P0665F...    33   3.5  
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    32   6.2  
UniRef50_Q17B84 Cluster: Serrate protein; n=2; Culicidae|Rep: Se...    32   6.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 436 FXLLRWVDELTAHLMLSGYWSP 371
           F LLRWVDELTAHL+LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Ciona
           intestinalis|Rep: Ets transcription factor Elf - Ciona
           intestinalis (Transparent sea squirt)
          Length = 598

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -1

Query: 277 NALLLHGRNKQGGGTYPRGLTRGPTTSNYANYNFAGLIFITRCYSFTVEVNREHLLSTYF 98
           +A +L  RN+ G  TY R   +    S   +YN +G  ++  C     E N+ H+ ST+ 
Sbjct: 399 SAKILFARNQSGLITYDRAQLKNSRCSVSVSYNRSGYQYMVDCRR---ENNKVHISSTWV 455

Query: 97  IRKIGTRLRD 68
             K+   L D
Sbjct: 456 PEKVSQELLD 465


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 239 WYLSARTHKRSYHQ 198
           WYL ARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 286 SNRNALLLHGRNKQGGGTYPRGLTRGPTTSNYANYNF 176
           + RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


>UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein
           P0665F09.120-1; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0665F09.120-1 - Oryza sativa subsp. japonica (Rice)
          Length = 496

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 32  GAFVLKRCTGVRIPQAGTNFSNEICTQQMFTIDFHGE 142
           G  ++ RCTGV I   G N   +I T      DFHGE
Sbjct: 199 GGGLISRCTGVVIGWDGANKRAKILTAASVVCDFHGE 235


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 31.9 bits (69), Expect = 6.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 158 NKNQTRKIIICVITGGRTSCESARIGTTALLISAVK 265
           +KN+ +K  + ++T G T C SA +GTT  ++   K
Sbjct: 317 SKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


>UniRef50_Q17B84 Cluster: Serrate protein; n=2; Culicidae|Rep:
           Serrate protein - Aedes aegypti (Yellowfever mosquito)
          Length = 1335

 Score = 31.9 bits (69), Expect = 6.2
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +2

Query: 14  LKDETSGAFVLKRCTGVRIPQAGTNFSNEICTQQMFTIDFHGEGITSCNKNQTRKIIICV 193
           + +ETSG+  L  C+G    ++ T  S+ +C Q  FT  F    +  C  N  +   IC+
Sbjct: 667 MTNETSGSTALTPCSGRGKCESSTLGSSCVC-QTGFTGPFCQHNVNECFSNPCKNSGICI 725

Query: 194 ITGGRTSCE 220
                 +CE
Sbjct: 726 DGDADYTCE 734


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,749,315
Number of Sequences: 1657284
Number of extensions: 10027349
Number of successful extensions: 21763
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21760
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)