Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20f04
         (173 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    32   0.047
Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical pr...    26   4.1  

>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 32.3 bits (70), Expect = 0.047
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +1

Query: 1   EGVTGPFLHIMASSLQSKWICLRLNDAIIKRHVLVL 108
           EGV G  +H++  + + + + +R+ND ++ +HV +L
Sbjct: 156 EGVVGKMMHLLLCNNREEGLGVRVNDELVDKHVKIL 191


>Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical
           protein F26F2.6 protein.
          Length = 611

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 41  RFKANGSVCALTTPSLNDMFSF*A-STQTSNT 133
           + K + + C  TTP L D F F   ST+ S T
Sbjct: 246 KMKVDETTCLFTTPQLLDSFKFGTQSTEPSTT 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,744,583
Number of Sequences: 27780
Number of extensions: 50147
Number of successful extensions: 153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 12,740,198
effective HSP length: 38
effective length of database: 11,684,558
effective search space used: 222006602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)