Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20e08
         (121 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RME5 Cluster: Predicted protein; n=1; Nematostella ve...    58   4e-08
UniRef50_A5AGR5 Cluster: Putative uncharacterized protein; n=1; ...    48   5e-05
UniRef50_Q7RPR4 Cluster: Putative uncharacterized protein PY0139...    44   7e-04
UniRef50_Q4XSX0 Cluster: Putative uncharacterized protein; n=1; ...    43   0.001
UniRef50_Q4X7X8 Cluster: Putative uncharacterized protein; n=1; ...    40   0.008
UniRef50_Q8SUR9 Cluster: Zinc finger C2H2 protein ECU08_0560; n=...    32   2.2  
UniRef50_A2Q271 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q0W8L6 Cluster: Valyl-tRNA synthetase; n=2; Archaea|Rep...    30   8.8  

>UniRef50_A7RME5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 404

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +1

Query: 28  KIGTIQRRLAWPLRKDDTQNREAFHIFF 111
           KIGTIQRRLAWPLRKDDTQ REAF IFF
Sbjct: 209 KIGTIQRRLAWPLRKDDTQIREAFQIFF 236


>UniRef50_A5AGR5 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 377

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = -3

Query: 83  CVSSLRRGHANLLCIVPIFSICTAEAS 3
           CVSSLRRGHANLLCIVPI S  + EAS
Sbjct: 239 CVSSLRRGHANLLCIVPILSDVSKEAS 265



 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 83  CVSSLRRGHANLLCIVPIFSICTAEAS 3
           CVSSLRRGHANLLCIVPI S  + E S
Sbjct: 41  CVSSLRRGHANLLCIVPILSDVSEETS 67



 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 83  CVSSLRRGHANLLCIVPIFSICTAEAS 3
           CVSSLRRGHANLLCIVPI S  + E S
Sbjct: 140 CVSSLRRGHANLLCIVPILSDVSXETS 166


>UniRef50_Q7RPR4 Cluster: Putative uncharacterized protein
          PY01392; n=1; Plasmodium yoelii yoelii|Rep: Putative
          uncharacterized protein PY01392 - Plasmodium yoelii
          yoelii
          Length = 37

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +1

Query: 4  LASAVHILKIGTIQRRLAWPLRKDDT 81
          L++ +   KIGTIQRRLAWPLRKDDT
Sbjct: 12 LSTEMPFAKIGTIQRRLAWPLRKDDT 37


>UniRef50_Q4XSX0 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium chabaudi|Rep: Putative uncharacterized
          protein - Plasmodium chabaudi
          Length = 44

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = -1

Query: 79 CHPCAGAMLIFSVSFQFLVYVLPKQV 2
          CHPCAGAMLIFSVSFQF     P ++
Sbjct: 2  CHPCAGAMLIFSVSFQFYQTASPGKI 27


>UniRef50_Q4X7X8 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium chabaudi|Rep: Putative uncharacterized
          protein - Plasmodium chabaudi
          Length = 62

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -3

Query: 80 VSSLRRGHANLLCIVPIFS 24
          VSSLRRGHANLLCIVPI S
Sbjct: 36 VSSLRRGHANLLCIVPILS 54


>UniRef50_Q8SUR9 Cluster: Zinc finger C2H2 protein ECU08_0560; n=1;
           Encephalitozoon cuniculi|Rep: Zinc finger C2H2 protein
           ECU08_0560 - Encephalitozoon cuniculi
          Length = 449

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -1

Query: 94  LHDFACHPCAGAMLIFSVSFQ 32
           L  + C P AGAMLIFSV FQ
Sbjct: 62  LSSYTCRPYAGAMLIFSVLFQ 82


>UniRef50_A2Q271 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 69

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 28  KIGTIQRRLAWPLRKDDT-QNREAFHI 105
           KI TI RRL W L KDDT Q+R   +I
Sbjct: 28  KIKTIHRRLTWLLHKDDTHQSRNGPNI 54


>UniRef50_Q0W8L6 Cluster: Valyl-tRNA synthetase; n=2; Archaea|Rep:
           Valyl-tRNA synthetase - Uncultured methanogenic archaeon
           RC-I
          Length = 814

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 116 FLKKMWNASRFCVSSLR 66
           FL K+WNASRFC   L+
Sbjct: 581 FLNKLWNASRFCAMHLQ 597


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,769,298
Number of Sequences: 1657284
Number of extensions: 1266172
Number of successful extensions: 3354
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3354
length of database: 575,637,011
effective HSP length: 20
effective length of database: 542,491,331
effective search space used: 10307335289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)