Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20e06
         (365 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   9.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   9.1  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 145 YT*INK*ILNCHLKGSRLVMHQS 213
           YT +NK +LN H+K    V   S
Sbjct: 266 YTCVNKSMLNSHMKSHSNVYRYS 288


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 145 YT*INK*ILNCHLKGSRLVMHQS 213
           YT +NK +LN H+K    V   S
Sbjct: 24  YTCVNKSMLNSHMKSHSNVYRYS 46


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 37  LIFILFSIVHCILVLE 84
           + F +F++VHC L  E
Sbjct: 528 VFFTVFNVVHCYLASE 543


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 125 NLHNDSFIHK*INKY 169
           NL  D+FIH+ ++ Y
Sbjct: 331 NLDKDAFIHRTVDDY 345


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 155 IYV*MNRYVNLTCT---HKPHLQVHDVSRTNI 69
           +Y+  N+ +N T     + PHLQV D+S  ++
Sbjct: 253 LYLGHNKLLNATKDLFGNMPHLQVLDLSHNSL 284


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 199 VMHQSQVNYFVLY*ENN 249
           ++H+ + NYF +  ENN
Sbjct: 323 ILHELRNNYFHMDLENN 339


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 199 VMHQSQVNYFVLY*ENN 249
           ++H+ + NYF +  ENN
Sbjct: 323 ILHELRNNYFHMDLENN 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,354
Number of Sequences: 336
Number of extensions: 1250
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)