Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20e04
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid deplete... 131 2e-31
Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical p... 34 0.036
Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical pr... 29 1.4
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical ... 27 4.2
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 27 5.5
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 27 5.5
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 27 5.5
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 27 5.5
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 27 5.5
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 27 5.5
AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical ... 27 7.3
AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine re... 26 9.7
>AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid depleted
protein 7 protein.
Length = 531
Score = 131 bits (317), Expect = 2e-31
Identities = 60/110 (54%), Positives = 81/110 (73%)
Frame = +3
Query: 3 ALKKLQLSLKDFRRICILKGIYPREPRNRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKL 182
ALKKLQL+LKDFRR+CI+KGIYP EP ++K+A KG+ K Y+ KDI FL HEPII K
Sbjct: 23 ALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKVFYYRKDINFLAHEPIINKF 82
Query: 183 RELKVYQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFVDALR 332
R+ KV+ +K+ +A++E K++K + P ++D IVKER+PTF ALR
Sbjct: 83 RDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFGSALR 132
>Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical
protein F11A5.15 protein.
Length = 191
Score = 34.3 bits (75), Expect = 0.036
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 323 INKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLL 201
I+KR ++ + N++F+I+P L + I+ L SC +N LL
Sbjct: 7 ISKRKSIYILIISNIFFFIIPLYLIVIGIWKLTSCPSNQLL 47
>Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical
protein R07B5.8b protein.
Length = 583
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 71 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 220
PRT +P+ + RR + LS I T R+N++ +G+ S+ +SC
Sbjct: 13 PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 60
>Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical
protein R07B5.8a protein.
Length = 568
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 71 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 220
PRT +P+ + RR + LS I T R+N++ +G+ S+ +SC
Sbjct: 58 PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 105
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 102 KGAGGIKTLYHT-KDIKFLLHEPIIWKLRELKVYQQ 206
KGA I+T Y T + + L++EP +W R KV +Q
Sbjct: 164 KGALNIRTCYQTYRYCEKLMNEPSVWVGRNKKVQEQ 199
>AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical
protein Y39C12A.3 protein.
Length = 315
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = -3
Query: 308 VSFLYYVINVYFWIVPQ------KLSHLAIFSLCSCTTNFLLIN 195
+S LYY+ N+Y I + K+ H AI++ C ++ +++I+
Sbjct: 30 ISILYYIFNLYVTIRVKHYKNNIKILHQAIYATCPFSSAYIIID 73
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resistance
related protein1 protein.
Length = 1540
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1163 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1202
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform e protein.
Length = 1534
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1157 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1196
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform c protein.
Length = 1534
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1157 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1196
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform b protein.
Length = 1534
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1157 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1196
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform a protein.
Length = 1528
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1151 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1190
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 198 YQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 320
+Q+ I+ A + R YG + KF+R+ + +D + YP+ V
Sbjct: 1157 FQESIQGASSIRAYGVVDKFIRE-SQHRVDENLATYYPSIV 1196
>AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical
protein F39E9.2 protein.
Length = 304
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 353 CETIIQISQSINKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLLI 198
C+T+ ++ ++ N++G + Y + WI P + S +F FL+I
Sbjct: 101 CQTLTKVVENPNRQGAVEVMYEYALVPWITPLQFSFDEMFLPSEKNDAFLVI 152
>AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine
receptor, class w protein134 protein.
Length = 376
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -2
Query: 297 LLCDQCLFLDSPAKTFSSC--HILAVLLHDEF 208
L+C+ CLFL S T ++C I+++L+ ++
Sbjct: 306 LICNHCLFLFSMILTINTCSHFIISMLMSSQY 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,151,465
Number of Sequences: 27780
Number of extensions: 212444
Number of successful extensions: 513
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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