Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20e04
         (424 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    29   0.022
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   0.61 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   2.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   3.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   10.0 

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.022
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 315 TWGIFPLLCDQCLFLDSPAKTFSSCHILAVLLHDEFFVDKPLVPS 181
           TW + P+LCD  + LD    T S   + A+ +     V +PL+ S
Sbjct: 103 TWELGPMLCDSWVSLDILLCTASILSLCAISIDRYLAVTQPLIYS 147


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 13/63 (20%), Positives = 26/63 (41%)
 Frame = +2

Query: 119 QNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSCKSTARIWQDEKVFAGLSRNKH*SHSK 298
           +N  +H +  +    +   E   +K ++    +C  +  IW+  K      R +  S S 
Sbjct: 285 ENETAHIKDSLIVLTSALQEMNKSKSITEPPKNCADSGSIWETGKNLFEFIRKQVLSGST 344

Query: 299 GKI 307
           GK+
Sbjct: 345 GKV 347


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 284 NVYFWIVPQKLSHLAIFSLCSCTTNFLLIN 195
           N Y WIV  K   +A   L     NF ++N
Sbjct: 370 NEYIWIVSNKYQKIANGDLNFNEVNFRILN 399


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding
          protein protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = +3

Query: 6  LKKLQLSLKDFRRICILKGIYPRE 77
          +++L+ ++K+ R++C  K   P+E
Sbjct: 3  IEELKKTIKNLRKVCSKKNDTPKE 26


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 302 FLYYVINVYFWIV 264
           FL+ V+NV +WI+
Sbjct: 411 FLFAVLNVTYWIM 423


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = -2

Query: 315 TWGIFPLLCDQCLFLDSPAKTFSSCHILAVLLHDEFFVDKPL 190
           +W +   +CD  + +D    T S  +++A+ +     V +P+
Sbjct: 251 SWSLPGFVCDFYIAMDVTCSTSSIFNLVAISIDRYIAVTQPI 292


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 338 QISQSINKRGVSFLYYVINVYFWIV 264
           QI    NK+GVS  +Y  NV + ++
Sbjct: 544 QIKDEANKKGVSLRFY--NVVYKLI 566


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 347 TIIQISQSINKRGVSFLY 294
           TI+ IS+ +NKR  + +Y
Sbjct: 514 TIVDISKLVNKRNNAKIY 531


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -3

Query: 296 YYVINVYFWI 267
           YYV+++++WI
Sbjct: 276 YYVMSLWYWI 285


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 104 FLSPLSVSRFSGVYSFQNT 48
           +LSPLS   F G  S   T
Sbjct: 219 YLSPLSAGLFQGGISISGT 237


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 104 FLSPLSVSRFSGVYSFQNT 48
           +LSPLS   F G  S   T
Sbjct: 90  YLSPLSAGLFQGGISISGT 108


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 104 FLSPLSVSRFSGVYSFQNT 48
           +LSPLS   F G  S   T
Sbjct: 219 YLSPLSAGLFQGGISISGT 237


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = +3

Query: 6   LKKLQLSLKDFRRICILKGIYPRE 77
           +++ + ++K+ R++C  K   P+E
Sbjct: 29  IEEAKKTIKNLRKVCSKKNDTPKE 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,282
Number of Sequences: 438
Number of extensions: 2469
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)