Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d23
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       29   0.12 
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    25   1.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   5.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.8  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 392 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 559
           +QV+PD   S K   ++N F+ND  E       +   +  + ++ R++   +  LL
Sbjct: 45  KQVHPDTGISSKAMSIMNSFVNDIFERIARKSRLAHYNKRSTITSREIQTAVRLLL 100


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = +2

Query: 380 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 559
           D+ C  V P     + + + + + LN  +    IY  V  +D+ +KL+   +   +  L+
Sbjct: 2   DYYCNFVSPPSQSVILVAKKLGIKLN--LRKINIYDPV-AMDTLSKLNPHHI---LPMLV 55

Query: 560 NNGTCRAHPCA 592
           +NGT    PCA
Sbjct: 56  DNGTVVFEPCA 66


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 527 RQVDFLIHALLNNGTCRAHPCASSCLPSGA 616
           R  D L   +L    CR  P A  CL +G+
Sbjct: 5   RSTDKLQMEILKRTVCRLKPSAHRCLLAGS 34


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 389 CEQVYPDKDFSLKLKR 436
           CE+ YPD  F++ L+R
Sbjct: 222 CEEPYPDIIFNITLRR 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,979
Number of Sequences: 2352
Number of extensions: 10314
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)