Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d22
         (334 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...   103   3e-23
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...   103   3e-23
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...   103   3e-23
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    97   2e-21
Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical pr...    29   0.81 
Z66561-3|CAA91455.1|  422|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    27   3.3  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    27   3.3  
Z81484-6|CAB03968.2|  314|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    27   4.3  
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    26   5.7  
Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical pr...    26   5.7  
AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical ...    26   5.7  
Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical p...    25   10.0 

>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score =  103 bits (247), Expect = 3e-23
 Identities = 44/68 (64%), Positives = 58/68 (85%)
 Frame = +2

Query: 2   PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 181
           PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H 
Sbjct: 312 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 371

Query: 182 GKSIRAVV 205
           G+S+R+V+
Sbjct: 372 GESLRSVL 379


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score =  103 bits (247), Expect = 3e-23
 Identities = 44/68 (64%), Positives = 58/68 (85%)
 Frame = +2

Query: 2   PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 181
           PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H 
Sbjct: 312 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 371

Query: 182 GKSIRAVV 205
           G+S+R+V+
Sbjct: 372 GESLRSVL 379


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score =  103 bits (247), Expect = 3e-23
 Identities = 44/68 (64%), Positives = 58/68 (85%)
 Frame = +2

Query: 2   PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 181
           PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++H 
Sbjct: 314 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHK 373

Query: 182 GKSIRAVV 205
           G+S+R+V+
Sbjct: 374 GESLRSVL 381


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 97.5 bits (232), Expect = 2e-21
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 2   PFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHA 181
           PFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH   + +IN AF ++  
Sbjct: 485 PFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDINAAFDVLRK 544

Query: 182 GKSIRA 199
           G+ +R+
Sbjct: 545 GEGLRS 550


>Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical
           protein R53.2 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 0.81
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 68  SVPKLVDEYLEKKLPLDEFVTH 133
           S+ KL+D+YL K++ +DE   H
Sbjct: 59  SIGKLIDQYLRKEIDMDEHALH 80


>Z66561-3|CAA91455.1|  422|Caenorhabditis elegans Hypothetical
           protein F08G12.3 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +2

Query: 41  AFGGYKSRESVPKLVDEYLEKKLPLDEFV--THNVPLKEINEAF 166
           A   ++ R++V + +  Y+EKK  L EFV    N+ L+E++  F
Sbjct: 288 AIRSWEDRKAVAEHIHTYVEKKSLLHEFVRKISNIGLRELSGFF 331


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
            C25D7.3 protein.
          Length = 2150

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 56   KSRESVP-KLVDEYLEKKLPLDEFVTHNVPLKEINEAF 166
            +  E++P K++  + E + P+ +F    +  KEINEAF
Sbjct: 1790 EEHETLPLKIIRVFEENEKPVHKFFMTQIIWKEINEAF 1827


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
            protein.
          Length = 2150

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 56   KSRESVP-KLVDEYLEKKLPLDEFVTHNVPLKEINEAF 166
            +  E++P K++  + E + P+ +F    +  KEINEAF
Sbjct: 1790 EEHETLPLKIIRVFEENEKPVHKFFMTQIIWKEINEAF 1827


>Z81484-6|CAB03968.2|  314|Caenorhabditis elegans Hypothetical
           protein C47A10.3 protein.
          Length = 314

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +2

Query: 140 PLKEINEAFHLMHAGKSIRAVVDM*FLRKNIYTIFVHLLNLFSSAFTTSIIKIHNMHFVY 319
           P   +N  + L +   +IRA+      RK I+ ++ H L L S      ++ + +   VY
Sbjct: 133 PFFLLNYIYSLTYYIPTIRAIPSQEIGRKEIFKLYPHFLELDSQEHPAFVVTLGDPLIVY 192


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 303 LCILIILVVNAEEKRFNKCTKIV*IFFLRNYM 208
           +C++++ +V A     NK  K+  IFFL +YM
Sbjct: 340 MCVVLVFLVGA----MNKIAKLTSIFFLLSYM 367


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 303 LCILIILVVNAEEKRFNKCTKIV*IFFLRNYM 208
           +C++++ +V A     NK  K+  IFFL +YM
Sbjct: 443 MCVVLVFLVGA----MNKIAKLTSIFFLLSYM 470


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 303 LCILIILVVNAEEKRFNKCTKIV*IFFLRNYM 208
           +C++++ +V A     NK  K+  IFFL +YM
Sbjct: 456 MCVVLVFLVGA----MNKIAKLTSIFFLLSYM 483


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 128  THNVPLKEINEAFHLMHAGKSIRAVV 205
            +H+ P  +  EAF  M AGK I  V+
Sbjct: 1894 SHSFPADKAEEAFRFMSAGKHIGKVI 1919


>Z81484-1|CAB03967.1|  314|Caenorhabditis elegans Hypothetical
           protein C47A10.2 protein.
          Length = 314

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 15/60 (25%), Positives = 28/60 (46%)
 Frame = +2

Query: 140 PLKEINEAFHLMHAGKSIRAVVDM*FLRKNIYTIFVHLLNLFSSAFTTSIIKIHNMHFVY 319
           P   +N  + L +   +IRA+ +    RK I+ ++ H L L S      ++ + +   VY
Sbjct: 133 PFFLLNYIYALTYYIPTIRAIPNQEIGRKEIFKLYPHFLELDSPEHPAFVVTLGDPLIVY 192


>AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.6 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 65  ESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAV 202
           E  PK+ DE+ EK   +DE +T N  + +  + F L     S + V
Sbjct: 379 EENPKVADEFNEKLENVDEDLTRNRTIHDRYQFFRLQTLRNSHKEV 424


>Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical
           protein T21C9.4 protein.
          Length = 103

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +2

Query: 65  ESVPKLVDEYLEKKLPLDEFVTHNV 139
           E + ++ +EYL+KK+P    +T+++
Sbjct: 30  EGICRVYEEYLKKKVPAQNEITYDI 54


>Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.16 protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 136 IVSDKFI*RQLLLQVLIY-KLWYTFSTFVTSKSCSLP 29
           I++  F+   L  Q + +  L+  FSTF T K C  P
Sbjct: 4   IIASNFVLSILFAQTVFHINLYLLFSTFFTKKVCYRP 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,210,487
Number of Sequences: 27780
Number of extensions: 161134
Number of successful extensions: 397
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)