Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d20
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal glutath...    24   3.0  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   5.2  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   5.2  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   5.2  

>AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal
           glutathione transferase GSTMIC2protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 226 LEKLKNERGYTYEDEMVCSKECLPNYEE 309
           +++ KN+   + ED  V SK+ +P Y++
Sbjct: 36  IQRFKNKAFASPEDTRVISKKLVPKYDD 63


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 184 IQPPF*RINHPEKYILEDFYGVAAAGPLFHYP 89
           + PP  ++  PE     D+    A+GP F+YP
Sbjct: 102 LTPPI-QLEKPENQARVDYIQDYASGPDFNYP 132


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 211 KTDGVLEKLKNERGYTYEDEMVCSKECL 294
           K   VLE    ER YT  D++  +  CL
Sbjct: 130 KAVDVLESFLYERSYTAADQLTVADICL 157


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 435 GRHAGHPERYLPQVHFGH 488
           G H G  +  +PQ H GH
Sbjct: 150 GHHMGTAQMTIPQHHMGH 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,973
Number of Sequences: 2352
Number of extensions: 13819
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)