Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d20
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015218-1|AAT94447.1|  203|Drosophila melanogaster RE42209p pro...   285   4e-77
AE014296-1840|AAN11908.1|  159|Drosophila melanogaster CG32068-P...   208   5e-54
AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p pro...    31   1.1  
AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-P...    31   1.1  
BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p pro...    29   4.3  
AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-P...    29   4.3  

>BT015218-1|AAT94447.1|  203|Drosophila melanogaster RE42209p
           protein.
          Length = 203

 Score =  285 bits (698), Expect = 4e-77
 Identities = 115/166 (69%), Positives = 145/166 (87%)
 Frame = +1

Query: 67  KMVQAWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNE 246
           KMVQ WYMD+E TDQRL+HH+NPP Y+ LDDL+ KTGVEYFKIN D Y++D  L +L+ +
Sbjct: 17  KMVQVWYMDTEETDQRLEHHRNPPAYLELDDLYQKTGVEYFKINADEYQSDNTLTELRAK 76

Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
           RGYTY+DE+ CS++CLP+Y  K+K+F+TEHLHTDEEIR IL+GSGYFDVRD ED W+RI 
Sbjct: 77  RGYTYDDEITCSEKCLPDYANKLKAFFTEHLHTDEEIRLILEGSGYFDVRDNEDNWLRIK 136

Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPADE 564
           V KGD+++IP+GIYHRFTLDTNN+I+ +R+F+GEPVW P+NRPADE
Sbjct: 137 VVKGDLIIIPAGIYHRFTLDTNNFIRTRRYFVGEPVWAPHNRPADE 182


>AE014296-1840|AAN11908.1|  159|Drosophila melanogaster CG32068-PA
           protein.
          Length = 159

 Score =  208 bits (507), Expect = 5e-54
 Identities = 83/125 (66%), Positives = 109/125 (87%)
 Frame = +1

Query: 190 KINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFIL 369
           +IN D Y++D  L +L+ +RGYTY+DE+ CS++CLP+Y  K+K+F+TEHLHTDEEIR IL
Sbjct: 14  QINADEYQSDNTLTELRAKRGYTYDDEITCSEKCLPDYANKLKAFFTEHLHTDEEIRLIL 73

Query: 370 DGSGYFDVRDGEDQWIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYN 549
           +GSGYFDVRD ED W+RI V KGD+++IP+GIYHRFTLDTNN+I+ +R+F+GEPVW P+N
Sbjct: 74  EGSGYFDVRDNEDNWLRIKVVKGDLIIIPAGIYHRFTLDTNNFIRTRRYFVGEPVWAPHN 133

Query: 550 RPADE 564
           RPADE
Sbjct: 134 RPADE 138


>AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p
           protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
 Frame = -2

Query: 291 TFLGTDHLIFICVTSFIL-KFF*YS--ISFICVY------VYFKIFNPRFRE*IIQRNIF 139
           TFL   H +F+  TS +L +F+ +   +  IC++      V +  +    +   +Q +++
Sbjct: 132 TFLHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLW 191

Query: 138 WRIFMVLQPLVRCFTIHVPCLYHFKNKN 55
           W+ ++ L  LV+   + + C+Y +   N
Sbjct: 192 WKKYLTLGQLVQFLLMFLHCMYTYFQPN 219


>AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-PA
           protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
 Frame = -2

Query: 291 TFLGTDHLIFICVTSFIL-KFF*YS--ISFICVY------VYFKIFNPRFRE*IIQRNIF 139
           TFL   H +F+  TS +L +F+ +   +  IC++      V +  +    +   +Q +++
Sbjct: 132 TFLHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLW 191

Query: 138 WRIFMVLQPLVRCFTIHVPCLYHFKNKN 55
           W+ ++ L  LV+   + + C+Y +   N
Sbjct: 192 WKKYLTLGQLVQFLLMFLHCMYTYFQPN 219


>BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p
           protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 128 LWCCSRWSVVSLSMYHACTILKTKI 54
           L CCS   +VS ++YH C  + TK+
Sbjct: 404 LSCCSYMGLVSYAVYHDCDPISTKL 428


>AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-PA
           protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 128 LWCCSRWSVVSLSMYHACTILKTKI 54
           L CCS   +VS ++YH C  + TK+
Sbjct: 404 LSCCSYMGLVSYAVYHDCDPISTKL 428


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,509,467
Number of Sequences: 53049
Number of extensions: 624125
Number of successful extensions: 1614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)