Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20d20
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68116-3|CAA92175.1| 178|Caenorhabditis elegans Hypothetical pr... 127 5e-30
U80455-6|AAB37884.1| 159|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 28 4.0
Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical... 28 5.3
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 27 7.0
AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical... 27 7.0
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 27 9.3
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z68116-3|CAA92175.1| 178|Caenorhabditis elegans Hypothetical
protein F42F12.4 protein.
Length = 178
Score = 127 bits (307), Expect = 5e-30
Identities = 59/161 (36%), Positives = 90/161 (55%)
Frame = +1
Query: 79 AWYMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGYT 258
A++M T + R + P + ++ + GVE K+N D L++L +
Sbjct: 2 AYFMTDVTKENRQDECRFSPNKEATEEDLLRIGVECTKVNFDDEHVQEDLDRLIKKYDMN 61
Query: 259 YEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIAVSKG 438
+ DE+ + +PN++EK+ F+ EHLH D E+R I G G+FDVR ++ WIRI V +G
Sbjct: 62 FHDEVHICRATMPNFDEKLDIFFEEHLHDDAELRVIKHGVGFFDVRTKDEAWIRIPVRRG 121
Query: 439 DMLVIPSGIYHRFTLDTNNYIKAKRFFIGEPVWLPYNRPAD 561
D + +P+GIYHRFT D + + A R F P W +NR AD
Sbjct: 122 DFVFLPAGIYHRFTTDPSEDVVALRLFRNNPKWTAFNRKAD 162
>U80455-6|AAB37884.1| 159|Caenorhabditis elegans Hypothetical
protein T01D1.4 protein.
Length = 159
Score = 118 bits (283), Expect = 4e-27
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Frame = +1
Query: 73 VQAWYMDS-ETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINID-TYKTDGVLEKLKNE 246
+Q W+M+ D+RL HH PP+ I+ L GV+Y+K+++D T L +K E
Sbjct: 1 MQIWHMEPFPCGDRRLPHHVFPPKKITTTQLGQLAGVQYYKVDLDDTASMKKRLSAVKTE 60
Query: 247 RGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQWIRIA 426
+ T+ D S+ L +++K++ FY + ++ I +++G+ Y+DV +D WIR+
Sbjct: 61 KNVTFTDMFTVSETML-EFDDKMEQFYEPQVQKEDVISLVVEGTCYYDVEPEDDSWIRVQ 119
Query: 427 VSKGDMLVIPSGIYHRFTLDTNNYIKAKRFF 519
V KGD++VIP G+ HRFT N++K +RFF
Sbjct: 120 VEKGDLIVIPKGLSHRFTTTPQNFVKIQRFF 150
>U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical
protein K07E1.1 protein.
Length = 221
Score = 112 bits (269), Expect = 2e-25
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Frame = +1
Query: 58 FVFKMVQAWYMDSETT-DQRLQHHKNPPEYISLDDLFSKTGVEYFKIN-IDTYKTDGVLE 231
F KMVQ W M+ D RL HH PP+ I+ D+L +TG Y+K++ +D L
Sbjct: 60 FQLKMVQIWQMEPYPCGDPRLPHHLFPPKKITPDELSKRTGTLYWKLDTLDQVALAKRLT 119
Query: 232 KLKNERGYTYEDEMVCSKECLPNYEEKIKSFYTEHLHTDEEIRFILDGSGYFDVRDGEDQ 411
LK E + ED E N+++KI+ + E E+ R I++G+ Y+DV D Q
Sbjct: 120 TLKLEHSFKKEDIFTLDAETTANFDDKIEELFEESSVPFEQARMIIEGTAYYDVEDKNGQ 179
Query: 412 WIRIAVSKGDMLVIPSGIYHRFTLDTNNYIKAKRFFIGE 528
W+RI GD+++IP+ RFT +N++K +RF+ E
Sbjct: 180 WVRIFCEYGDLILIPANTCFRFTTTPHNFVKMRRFYKDE 218
>U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical
protein C15B12.2 protein.
Length = 269
Score = 30.7 bits (66), Expect = 0.76
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 147 NIFWRIFMVLQPLVRCFTIHVPCLYHFKNKNN 52
++FW I + LV + +PCLYH+ ++N
Sbjct: 60 HMFWYILTFITYLVWTLLLWIPCLYHYTCRHN 91
>Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical
protein T26G10.4 protein.
Length = 347
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 401 VRINGSVLPCPRETCWSSRAVSTTGSLWTP 490
++ G +PCPR T + VST LW+P
Sbjct: 150 IKDGGLGVPCPRVTNMVTFVVSTMKKLWSP 179
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 22 KLFTYVHI*LIIFVFKMVQAWYMDSETTDQRLQHHKNPPEYISLDD-LFSKTGVEYFKIN 198
+L TY H+ VF ++ AW E Q + H K+P + +D L + G+ F
Sbjct: 159 QLGTYRHLMCAFAVFSLIYAWI---EVFTQPVMHTKDPVFIVFMDSPLKYQAGIGNFVTC 215
Query: 199 IDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYE 306
+ V+ L + ++Y VC E LP +
Sbjct: 216 LYCGSFALVISLLAAQ--FSYRFIAVCRPEILPKLD 249
>Z73976-2|CAA98285.1| 360|Caenorhabditis elegans Hypothetical
protein T07C12.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 267 IFICVTSFILKFF*YSISFICVYVYFKI 184
I + +T I FF + I+ +C+ VY KI
Sbjct: 30 IIVSITELIFYFFAFYINSVCLKVYLKI 57
>AC006638-10|AAK85488.1| 242|Caenorhabditis elegans Hypothetical
protein F41G4.8 protein.
Length = 242
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +1
Query: 85 YMDSETTDQRLQHHKNPPEYISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGYTYE 264
Y+ S + Q + E +D+ + + +E + I Y T + N + + E
Sbjct: 7 YLLSAAVSCQFQDFEGSGEEALIDEYWLQRLIE--NVGIPHYLTQKAYQLTANAKEHVDE 64
Query: 265 DEMVCSKECLPNYEEKIKSFYTEHLHTD 348
DE++ +P+Y ++ F T+ L TD
Sbjct: 65 DEILTLDASVPDYARQV--FTTQVLSTD 90
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 561 ISRPIVRQPNRLTDEETFCFYVVIGVQSEPVVDTARDDQH 442
+ RPI+ Q +R+ D ++FC +V +Q + T + H
Sbjct: 166 VERPILYQVDRIRDGKSFCTRLVKALQDGEAIFTVQISFH 205
>AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical
protein C16C4.11 protein.
Length = 278
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 65 LKWYKHGTWIVKQRTSGC 118
+KW K GTWI R S C
Sbjct: 88 MKWTKRGTWIFLTRPSRC 105
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 489 GVQSEPVVDTARDDQHVSLGHGNTDPLILTIS 394
GVQ V DT R + HV+ G+ + DPL IS
Sbjct: 472 GVQIGNVKDTIRFE-HVAFGYADRDPLFHNIS 502
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 481 LDTNNYIKAKRFFIGEPVWLPYNR 552
L++ K ++FF GEP+W Y R
Sbjct: 251 LESMKSTKYEKFFEGEPIWSVYKR 274
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 481 LDTNNYIKAKRFFIGEPVWLPYNR 552
L++ K ++FF GEP+W Y R
Sbjct: 256 LESMKSTKYEKFFEGEPIWSVYKR 279
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 145 ISLDDLFSKTGVEYFKINIDTYKTDGVLEKLKNERGYTYEDEMVCSKECLPNYEEKIKSF 324
IS+ D+ ++F ++ Y+ + L+ +K+ GY+Y ++ + C P+ +S
Sbjct: 116 ISIQDVVVVPPAKWF---LNFYRPEDALKVMKHLNGYSYRGHILAVRFCYPDGTYGDESA 172
Query: 325 YTE 333
TE
Sbjct: 173 LTE 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,222,756
Number of Sequences: 27780
Number of extensions: 330128
Number of successful extensions: 962
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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