Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d19
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892...    29   3.3  
09_06_0291 - 22066550-22067610,22067721-22067975,22068093-220682...    27   9.9  

>03_05_1014 -
           29687343-29687410,29688054-29688191,29689246-29689294,
           29689623-29689728,29690184-29690332,29690840-29690921,
           29691308-29691360,29691644-29691729,29691855-29691909,
           29692179-29692579,29693564-29693660,29694191-29694322,
           29694426-29694476,29694659-29694751,29694917-29694992,
           29695711-29695856,29696009-29696043,29696056-29696107,
           29696290-29696401,29696617-29696813,29697456-29697560,
           29697667-29697819,29698317-29698424,29698608-29698752,
           29699374-29699432,29701397-29701441,29701677-29701730,
           29701901-29702113,29702873-29702958,29704492-29704572,
           29704670-29704729,29705599-29705644,29706212-29706286,
           29706376-29706512,29708306-29708366,29708726-29708743,
           29709710-29709743,29709811-29709902,29709997-29710029
          Length = 1260

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 115 NFMKIVGAVSEIQIIYNNYKQ 177
           NF  IV AVSE + IYNN KQ
Sbjct: 783 NFATIVAAVSEGRAIYNNTKQ 803


>09_06_0291 -
           22066550-22067610,22067721-22067975,22068093-22068207,
           22068329-22068381,22068467-22068724,22069110-22069160,
           22069577-22069822,22070427-22070652,22070984-22071100
          Length = 793

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 137 APTIFIKFSIQGISGAINRSSYD 69
           AP +F+ F + GI GA+N   YD
Sbjct: 243 APIVFVWFILIGILGAVNICKYD 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,712,800
Number of Sequences: 37544
Number of extensions: 202386
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)