Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d15
         (323 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24HH6 Cluster: Protein kinase domain containing protei...    33   1.2  
UniRef50_Q23AG7 Cluster: Putative uncharacterized protein; n=2; ...    31   6.5  

>UniRef50_Q24HH6 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 665

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 260 LIESDNDHVWKLSSTKNNYKEYLTQFKSK 174
           L  SD  H+WK+S  K N K+YL+ F  K
Sbjct: 493 LFYSDIWHLWKISEHKKNQKQYLSNFVKK 521


>UniRef50_Q23AG7 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 630

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -1

Query: 260 LIESDNDHVWKLSSTKNNYKEYLTQF 183
           LIE+ N +V KL+ST+NN+ ++  Q+
Sbjct: 403 LIEAKNINVQKLASTENNFSQFFPQY 428


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,007,322
Number of Sequences: 1657284
Number of extensions: 4160804
Number of successful extensions: 7136
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7134
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)