Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20d15
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    19   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = -2

Query: 148 IIKGGNLCIWTKK 110
           ++ GG +C+W+++
Sbjct: 504 LVLGGEVCLWSEQ 516


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 257 IESDNDHVWKLSSTKNNYKEY 195
           IE + DH WK + +      Y
Sbjct: 221 IEDEPDHKWKKNDSSKKKTRY 241


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 75  YSNQSVLTYQ*HFFVQMHRLPPLIIDDSSI 164
           +S  SV   Q H F  + +L  + +DD+ I
Sbjct: 99  FSFNSVRNVQQHTFADLIQLEQIHLDDNRI 128


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 160 LESSIIKGGNLCIWTKK 110
           L    I GG  C+W+++
Sbjct: 542 LNKKQILGGEACLWSEQ 558


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
          protein 6 protein.
          Length = 251

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 3  INNRLSINFYLMQVLNR 53
          +NNR  +N+Y   +L++
Sbjct: 34 LNNRRMVNYYAACLLSK 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,949
Number of Sequences: 336
Number of extensions: 1285
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)