Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20c24
(456 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 245 3e-64
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 210 1e-53
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 187 1e-46
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 177 7e-44
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 173 2e-42
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 170 1e-41
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 169 2e-41
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 163 2e-39
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 155 6e-37
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 142 2e-33
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 136 2e-31
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 136 2e-31
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 136 3e-31
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 135 4e-31
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 133 2e-30
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 132 3e-30
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 130 1e-29
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 120 2e-26
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 118 5e-26
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 118 6e-26
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 118 8e-26
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 104 8e-22
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 100 3e-20
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 95 8e-19
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 93 2e-18
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 88 7e-17
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 87 2e-16
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 86 4e-16
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 82 6e-15
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 74 1e-12
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 73 3e-12
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 72 5e-12
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 71 2e-11
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 70 3e-11
UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 67 2e-10
UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivi... 65 6e-10
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 62 4e-09
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 1e-08
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 59 5e-08
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 58 9e-08
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 58 1e-07
UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candida... 54 2e-06
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 53 3e-06
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 52 4e-06
UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2; Methano... 52 8e-06
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 51 1e-05
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 51 1e-05
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 50 2e-05
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 50 3e-05
UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14; Clostr... 49 5e-05
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 49 5e-05
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 48 7e-05
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 48 7e-05
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 48 1e-04
UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27; Gammap... 48 1e-04
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 48 1e-04
UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellul... 47 2e-04
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 47 2e-04
UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal prote... 46 3e-04
UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3; Fusobac... 46 4e-04
UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candida... 45 7e-04
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 45 7e-04
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 45 7e-04
UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3; Bacteri... 45 9e-04
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 44 0.001
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 44 0.001
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 44 0.002
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 44 0.002
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 44 0.002
UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23; Firmic... 43 0.003
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 43 0.003
UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borreli... 43 0.003
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 43 0.003
UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 42 0.005
UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26; Firmic... 42 0.008
UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2; Wolbach... 42 0.008
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 42 0.008
UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55; Alphap... 41 0.011
UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellula... 41 0.011
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 41 0.015
UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1; Cenarch... 41 0.015
UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellul... 40 0.019
UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2; Deltapr... 40 0.019
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 40 0.025
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 40 0.025
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 40 0.025
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 40 0.034
UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1; Maripro... 40 0.034
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.044
UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candida... 39 0.059
UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 38 0.077
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 38 0.077
UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2; Flavoba... 38 0.10
UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8; Bactero... 37 0.18
UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 37 0.18
UniRef50_Q82X86 Cluster: 50S ribosomal protein L23; n=5; Betapro... 37 0.24
UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candida... 37 0.24
UniRef50_P06390 Cluster: Chloroplast 50S ribosomal protein L23; ... 37 0.24
UniRef50_A5K9F3 Cluster: Phosphomethylpyrimidine kinase, putativ... 36 0.31
UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56; Firmic... 36 0.55
UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureapla... 35 0.72
UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2; ... 35 0.72
UniRef50_Q2LQ99 Cluster: 50S ribosomal protein L23; n=4; Bacteri... 35 0.72
UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23; ... 35 0.72
UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n... 35 0.95
UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4; Mollicu... 35 0.95
UniRef50_Q4PG94 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1; Stigmat... 34 1.7
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of str... 34 1.7
UniRef50_Q6F1Z2 Cluster: 50S ribosomal protein L23; n=3; Firmicu... 34 1.7
UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal ... 33 2.2
UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces cere... 33 2.9
UniRef50_A1AX35 Cluster: TRNA delta(2)-isopentenylpyrophosphate ... 33 3.8
UniRef50_Q9TJQ6 Cluster: Plastid 50S ribosomal protein L23; n=2;... 33 3.8
UniRef50_UPI0000E49402 Cluster: PREDICTED: similar to alpha 10 s... 32 5.1
UniRef50_A4WCZ5 Cluster: ImpA domain protein; n=3; Enterobacter ... 32 5.1
UniRef50_Q22EY1 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_P78347 Cluster: General transcription factor II-I; n=77... 32 5.1
UniRef50_Q9NW15-2 Cluster: Isoform 2 of Q9NW15 ; n=3; Catarrhini... 32 6.7
UniRef50_Q2ST58 Cluster: Lipoprotein, putative; n=3; Mycoplasma|... 32 6.7
UniRef50_A7CUV3 Cluster: Ribosomal protein L25/L23; n=1; Opituta... 32 6.7
UniRef50_Q4UCB5 Cluster: 50S ribosomal protein L12, putative; n=... 32 6.7
UniRef50_Q7RC77 Cluster: NAD(P) transhydrogenase beta subunit, p... 31 8.9
UniRef50_A5DHF9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 245 bits (600), Expect = 3e-64
Identities = 114/136 (83%), Positives = 125/136 (91%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA NIIKFP
Sbjct: 112 ALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNIIKFP 171
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+EAAMKKIEDNNTLVFIVHT ANK+HIK++VKKLYD++V KVNTLIRPDGKKKAYVRL
Sbjct: 172 LTTEAAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDVDVLKVNTLIRPDGKKKAYVRL 231
Query: 363 ARDYDALDVANKIGII 410
RDYDALDVANKIGII
Sbjct: 232 TRDYDALDVANKIGII 247
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 210 bits (513), Expect = 1e-53
Identities = 102/136 (75%), Positives = 114/136 (83%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFP
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFP 80
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRL
Sbjct: 81 LTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRL 140
Query: 363 ARDYDALDVANKIGII 410
A DYDALDVANKIGII
Sbjct: 141 APDYDALDVANKIGII 156
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 187 bits (455), Expect = 1e-46
Identities = 91/136 (66%), Positives = 107/136 (78%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKFP
Sbjct: 21 ALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKFP 80
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+E+AMKK DNNT VF+V ANKH IK AVK+LYDI++ KVNTLI PDG+KKAYV L
Sbjct: 81 LTTESAMKKTGDNNTRVFMVDVKANKHQIKQAVKRLYDIDMIKVNTLIWPDGEKKAYVPL 140
Query: 363 ARDYDALDVANKIGII 410
A DYDALDVANKIGII
Sbjct: 141 APDYDALDVANKIGII 156
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 177 bits (432), Expect = 7e-44
Identities = 91/139 (65%), Positives = 104/139 (74%), Gaps = 3/139 (2%)
Frame = +3
Query: 3 ALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 173
ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D Y I+
Sbjct: 17 ALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDHYQIL 76
Query: 174 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 353
K+PLT+E+AMKKIEDNNTLVFIV A+K IK AVKK+YDI KVNTLIRPDG KKAY
Sbjct: 77 KYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQSKKVNTLIRPDGTKKAY 136
Query: 354 VRLARDYDALDVANKIGII 410
VRL DYDALDVANKIGII
Sbjct: 137 VRLTPDYDALDVANKIGII 155
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 173 bits (421), Expect = 2e-42
Identities = 84/136 (61%), Positives = 104/136 (76%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKFP
Sbjct: 21 ALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKFP 80
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VRL
Sbjct: 81 LTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVRL 140
Query: 363 ARDYDALDVANKIGII 410
A DYDALDVANKIGII
Sbjct: 141 APDYDALDVANKIGII 156
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 170 bits (413), Expect = 1e-41
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II+ P
Sbjct: 69 ALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRIIRHP 128
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
+T+EAAMKKIEDN+TLVF+V ANK IKAAV+++Y I VAKVNTL P KKAYV+L
Sbjct: 129 VTTEAAMKKIEDNDTLVFVVDRRANKPAIKAAVQEMYKIKVAKVNTLNCPKNIKKAYVKL 188
Query: 363 ARDYDALDVANKIGII 410
D+DALDVANKIGII
Sbjct: 189 PPDFDALDVANKIGII 204
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 169 bits (411), Expect = 2e-41
Identities = 79/136 (58%), Positives = 102/136 (75%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +I+ P
Sbjct: 7 ATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQP 66
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
+TSE AMKK+ED N LVF V ANK+ IK AVK+LY+++V KVNTL+RP+G KKAYVRL
Sbjct: 67 ITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRL 126
Query: 363 ARDYDALDVANKIGII 410
DYDALD+AN+IG I
Sbjct: 127 TADYDALDIANRIGYI 142
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 163 bits (396), Expect = 2e-39
Identities = 79/96 (82%), Positives = 86/96 (89%)
Frame = +3
Query: 123 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN 302
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDID 60
Query: 303 VAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 410
VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct: 61 VAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 96
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 155 bits (375), Expect = 6e-37
Identities = 76/137 (55%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II P
Sbjct: 20 AKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVHP 79
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
L +E A+KKIE+ NTLVFIV ANK IK A+KKLYDI+ K+NTLIRPDG KKA+ RL
Sbjct: 80 LNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKKLYDIDTVKINTLIRPDGSKKAFARL 139
Query: 363 ARDYDALDV-ANKIGII 410
D DALD+ A K+G++
Sbjct: 140 TADVDALDIAATKLGLV 156
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 142 bits (345), Expect = 2e-33
Identities = 69/136 (50%), Positives = 93/136 (68%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K P
Sbjct: 34 AKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKAP 93
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+E+A +KIE +NT+ F+V ANK + AV K+YD+ V +VNTLI P G+KKA+V L
Sbjct: 94 LTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTL 153
Query: 363 ARDYDALDVANKIGII 410
+ +++A DVANKIG+I
Sbjct: 154 SPEFEAADVANKIGLI 169
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 136 bits (329), Expect = 2e-31
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
ALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEPPR+PKYPRKSLPKRNRMDAYNIIK+P
Sbjct: 155 ALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEPPRNPKYPRKSLPKRNRMDAYNIIKYP 214
Query: 183 LTSEAAM 203
LTSEAAM
Sbjct: 215 LTSEAAM 221
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 136 bits (329), Expect = 2e-31
Identities = 64/119 (53%), Positives = 82/119 (68%)
Frame = +3
Query: 54 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLV 233
RK FRRP T+ P K +N+ DA+ II++PLT++ AMKKIE+NNTL
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 234 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 410
FIV + ANK IK A++KLY + KVNTLIRPDG KKAY+RL+ YDALD ANK+G++
Sbjct: 106 FIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGLV 164
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 136 bits (328), Expect = 3e-31
Identities = 71/134 (52%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Frame = +3
Query: 15 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 188
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 189 SEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 368
SE AMKKIE+ NTLVFI A+K I +VK L+ I+ KVN L R +G KKAYVRL++
Sbjct: 122 SEKAMKKIEEINTLVFICDKRADKKKITKSVKNLFGISCEKVNVLNRLNGDKKAYVRLSK 181
Query: 369 DYDALDVANKIGII 410
D+DAL+VANKIGI+
Sbjct: 182 DHDALEVANKIGIL 195
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 135 bits (327), Expect = 4e-31
Identities = 71/134 (52%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = +3
Query: 12 AQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIKFPLT 188
A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I+++PLT
Sbjct: 20 ASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVRYPLT 78
Query: 189 SEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 368
+E+AMK IE+ NTLVF+V ANK + AV +LYDI VNTLIRPDG+KKA+VRL+
Sbjct: 79 TESAMKMIEELNTLVFVVDPRANKAKVAKAVSQLYDITPVHVNTLIRPDGQKKAFVRLSP 138
Query: 369 DYDALDVANKIGII 410
D DALDVANKIGII
Sbjct: 139 DQDALDVANKIGII 152
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 133 bits (321), Expect = 2e-30
Identities = 67/119 (56%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
Frame = +3
Query: 57 KIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNR-MDAYNIIKFPLTSEAAMKKIEDNNTLV 233
KIR + HF R +T P+ PK R + ++ +D ++IIK+PLT+E +MK IE+ NTLV
Sbjct: 36 KIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIKYPLTTEKSMKMIEEINTLV 95
Query: 234 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 410
FIV + ANK I AV +LYD+ +VNTL RPDG KKAYVRL+ D DALDVANKIGII
Sbjct: 96 FIVDSRANKEKIAKAVSELYDVKCVRVNTLNRPDGLKKAYVRLSPDQDALDVANKIGII 154
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 132 bits (320), Expect = 3e-30
Identities = 68/123 (55%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Frame = +3
Query: 48 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 221
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEI 84
Query: 222 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKI 401
NTLVFI A+K IK +VK L+DI AKVN L R +G KKAYVRL++D+DAL+VANKI
Sbjct: 85 NTLVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKAYVRLSKDHDALEVANKI 144
Query: 402 GII 410
GI+
Sbjct: 145 GIL 147
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 130 bits (315), Expect = 1e-29
Identities = 66/134 (49%), Positives = 89/134 (66%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLT 188
K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+IIK P+T
Sbjct: 23 KKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDIIKRPIT 82
Query: 189 SEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 368
+E+AMK +E NT+VF+V+ ANK IK AV KLYD+ VA VNT+ KKA+V+L+
Sbjct: 83 TESAMKMVETLNTIVFLVNERANKTQIKYAVNKLYDVKVANVNTVNTFGDGKKAFVKLSP 142
Query: 369 DYDALDVANKIGII 410
D +A+DVA++IGII
Sbjct: 143 DVEAVDVASRIGII 156
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 120 bits (288), Expect = 2e-26
Identities = 66/133 (49%), Positives = 84/133 (63%), Gaps = 24/133 (18%)
Frame = +3
Query: 84 RPKTFEPPRHPKYPRKSLPKRNRMDAYN------------------------IIKFPLTS 191
RP+T + R P YPR S+P + ++D ++ I+K PL +
Sbjct: 127 RPRTLKHERKPAYPRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKHPLAN 186
Query: 192 EAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARD 371
E A+ K E+NNTLVFIV ANK IK AVK++YDI+ AKVNTLIRP+G KKAY RL D
Sbjct: 187 ETALAKTENNNTLVFIVDARANKRQIKEAVKRMYDIDCAKVNTLIRPNGDKKAYCRLTAD 246
Query: 372 YDALDVANKIGII 410
+DALDVAN+IGII
Sbjct: 247 HDALDVANRIGII 259
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 118 bits (285), Expect = 5e-26
Identities = 61/137 (44%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIK 176
ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D ++++
Sbjct: 7 ALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLLR 63
Query: 177 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYV 356
+P+ ++ +IE NNT+VFIV A+K I+ A + +++ VA+VNTLI P G KKA++
Sbjct: 64 YPIKTDENTTQIEKNNTIVFIVDRRASKPEIRKAFETVFETKVARVNTLITPLGLKKAFI 123
Query: 357 RLARDYDALDVANKIGI 407
RLA D A+DVA+K+G+
Sbjct: 124 RLAPDVQAMDVASKMGL 140
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 118 bits (284), Expect = 6e-26
Identities = 59/81 (72%), Positives = 65/81 (80%)
Frame = +3
Query: 87 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHH 266
PKT R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIED NTLVFIV ANKH
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIED-NTLVFIVDVKANKHQ 61
Query: 267 IKAAVKKLYDINVAKVNTLIR 329
IK AVKKLYDI+VAKVN LIR
Sbjct: 62 IKQAVKKLYDIDVAKVNALIR 82
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 118 bits (283), Expect = 8e-26
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
AL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYNIIK+P
Sbjct: 145 ALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNIIKYP 204
Query: 183 LTSEAAMK 206
LT+EAAMK
Sbjct: 205 LTTEAAMK 212
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 104 bits (250), Expect = 8e-22
Identities = 59/139 (42%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIR----NSVHFRRPKTF-EPPRHPKYPRKSLPKRNRMDAYNII 173
KAQ+ K+V + R N H +P PR + R+ P +D N++
Sbjct: 12 KAQKAAKNARVAKKVIRARTHFQNRFHTAKPLALARKPRFTRLTRQLKPITKGLDFQNVL 71
Query: 174 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 353
K PL +E MKK+ED NT+VF V+ A K IK A K+Y++ V KVN L GKKKAY
Sbjct: 72 KHPLITEKDMKKMEDENTMVFYVNQKATKPQIKRAFSKIYEVKVRKVNILNTFGGKKKAY 131
Query: 354 VRLARDYDALDVANKIGII 410
+RL + DAL++ANKIGII
Sbjct: 132 IRLGGENDALNLANKIGII 150
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 99.5 bits (237), Expect = 3e-20
Identities = 49/108 (45%), Positives = 71/108 (65%)
Frame = +3
Query: 84 RPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKH 263
+PKT + + KYPR+ L D Y I++ P+ +EAA+K I D N+L+F V A+K
Sbjct: 92 QPKTSKKAKKLKYPRRIL------DVYQILQSPIITEAAIKNIADENSLLFTVDVRADKK 145
Query: 264 HIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 407
I+ A+ + + V KVNTLIRPDG KKAY+ L ++Y+A ++A KIGI
Sbjct: 146 MIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEYNASELAKKIGI 193
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 94.7 bits (225), Expect = 8e-19
Identities = 45/94 (47%), Positives = 67/94 (71%)
Frame = +3
Query: 129 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 308
K++ KRN + Y + +P+TSE+AMKKI+ +NTL F+V NK+ +K + KL+ +
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFLVEPMNNKNSLKKIISKLFKVKTI 83
Query: 309 KVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 410
K+N+LI +GKKK +V+L ++DALDVANKIG I
Sbjct: 84 KINSLISMNGKKKIFVKLGPEHDALDVANKIGYI 117
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +3
Query: 108 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKK 287
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT VFIV ANKH I+ A +
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIEQAGET 107
Query: 288 LYDINVAKVNTL 323
LYDI+ A V TL
Sbjct: 108 LYDIDTANVTTL 119
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 88.2 bits (209), Expect = 7e-17
Identities = 42/85 (49%), Positives = 60/85 (70%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 335
D ++++ +P+ +E AM+ +E N L FIV ANK IK AV++L+D+ V KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 336 GKKKAYVRLARDYDALDVANKIGII 410
G+KKAYV+L +Y A DVA +GI+
Sbjct: 71 GEKKAYVKLKPEYRAEDVAVDLGIL 95
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 87.0 bits (206), Expect = 2e-16
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
+D Y IIKFPL +E+AMKKIED++ LVF NK VKKLYDI VAKV+TL
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVNKQ----VVKKLYDIYVAKVSTLFWL 96
Query: 333 DGKKKAYVRLARDYDALDVANKI 401
DG+KK Y+ L + +ALDVANK+
Sbjct: 97 DGEKKTYIYLTPNCNALDVANKM 119
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 85.8 bits (203), Expect = 4e-16
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Frame = +3
Query: 63 RNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIV 242
R ++ F +PKT R P + +P+R+++ + I P + + ++ EDN T VF V
Sbjct: 24 RRALAFWQPKTLWLWRQPNTLSR-MPRRSQLKHHQI---PPDNWVSQEETEDN-TSVFTV 78
Query: 243 HTSANKHHIKAAVKK---LYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 410
ANK +K AVKK + DI +AKVNTLIRP+G+ K YV LA DY+ LDVANKIG I
Sbjct: 79 DVQANKSQMKEAVKKVNDICDIAMAKVNTLIRPNGENKMYVWLAPDYEPLDVANKIGFI 137
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 81.8 bits (193), Expect = 6e-15
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSL-PKRNRMDAYNIIKF 179
A A + + +G+ K V K RN F + PR P + K++ P + + Y II+
Sbjct: 5 AQAAAQTLAQGQK-KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIRG 63
Query: 180 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 359
P+TS+ + KIE+ NT+ F V A K I AA +LY + KV T+I KKAY+R
Sbjct: 64 PVTSDKSTVKIENENTMTFWVDIKATKTEIAAAFNRLYKVKPVKVCTVITSKFVKKAYIR 123
Query: 360 LARDYDALDVANKIG 404
L + +A+++A +IG
Sbjct: 124 LPANVEAMNIATEIG 138
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 74.1 bits (174), Expect = 1e-12
Identities = 32/85 (37%), Positives = 55/85 (64%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
MD Y +I P +E +M I+ NN L F+V + K ++ A ++L+ + V +VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 333 DGKKKAYVRLARDYDALDVANKIGI 407
G+K AY++LA+++ A D+A K+G+
Sbjct: 61 RGQKIAYIKLAKEHSAEDIAVKLGV 85
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 72.9 bits (171), Expect = 3e-12
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
+IK L +E ++ ++E N L IV A K HIK ++KL+++ V +VNTLI P G+KK
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKK 62
Query: 348 AYVRLARDYDALDVANKIGI 407
AY++L DY A ++ +K+G+
Sbjct: 63 AYIKLKPDYSAEEILSKLGV 82
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 72.1 bits (169), Expect = 5e-12
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +3
Query: 201 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
MKKIEDNNTLVF V A KH IK AVKKLYD +VAKV+ LIRPD ++
Sbjct: 1 MKKIEDNNTLVFTVDVKATKHQIKQAVKKLYDTDVAKVHALIRPDAGRR 49
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 159 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 338
++++IK P +E AM ++ N L F V A+K + AV++ YD+ V +VNT DG
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG 61
Query: 339 KKKAYVRLARDYDALDVANKIGI 407
+KKA VRL+ D DA +VA++IG+
Sbjct: 62 EKKAVVRLSEDDDAQEVASRIGV 84
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 69.7 bits (163), Expect = 3e-11
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
MD Y++I P SE M +I D N + F+V SANK IK A + LYD V VNT I P
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITP 60
Query: 333 DGKKKAYVRLARDYDALDVANKIGI 407
G K A + L A D+A ++G+
Sbjct: 61 RGNKVATIELEEADAAEDIAVRLGV 85
>UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Uncultured methanogenic archaeon RC-I
Length = 82
Score = 66.9 bits (156), Expect = 2e-10
Identities = 32/80 (40%), Positives = 51/80 (63%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
IIK+P +E A ++ NNTL F+V A K IK A++++Y++ V KV T I G KK
Sbjct: 2 IIKYPFITEKATLSLDKNNTLQFMVDMRATKPQIKKAIEEMYNVKVVKVTTQITARGGKK 61
Query: 348 AYVRLARDYDALDVANKIGI 407
A V L+ + A ++A+++G+
Sbjct: 62 AVVTLSPENRAEEIASRLGV 81
>UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivirga
maquilingensis IC-167|Rep: 50S ribosomal protein L23 -
Caldivirga maquilingensis IC-167
Length = 86
Score = 65.3 bits (152), Expect = 6e-10
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
I +F LT E A++ E NTL +V S NK IK V+K Y + V V TLI +G+KK
Sbjct: 7 ITRFVLT-EKAIRLAEKENTLTIVVPRSVNKKVIKDYVEKAYKVKVIDVRTLITMEGEKK 65
Query: 348 AYVRLARDYDALDVANKIGII 410
AYVRL+ + +A+++ +G++
Sbjct: 66 AYVRLSSENNAIELLTNLGLL 86
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 62.5 bits (145), Expect = 4e-09
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAM--KKIED--------NNTLVFIVHTSANKHHIKAAVKKLYDIN 302
+D Y++IK P +E + +++ D NN + FIV K IKAAV++L D+
Sbjct: 2 IDPYSVIKMPWITEKTLEARRVSDKEGGYRENNNRIEFIVRRETTKADIKAAVEELLDVQ 61
Query: 303 VAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 404
V KVNT I G K A VRLA YDA D A K+G
Sbjct: 62 VVKVNTRITITG-KHASVRLAEGYDAEDAALKLG 94
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 155
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 58.8 bits (136), Expect = 5e-08
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
I+K+P +E A +E + L FIV A+K IK A++K++D V +V TL+ G+KK
Sbjct: 2 ILKYPYATEKASMIVERDGQLQFIVDRKASKGQIKVAIEKMFDQPVTRVRTLMNNRGEKK 61
Query: 348 AYVRLARDYDALDVANKIGII 410
A V + A ++ +++GI+
Sbjct: 62 AMVSFSNPKAAEEILSRLGIM 82
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 58.0 bits (134), Expect = 9e-08
Identities = 33/102 (32%), Positives = 52/102 (50%)
Frame = +2
Query: 119 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 298
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 299 KCC*SQHTHQA*W*EESVXXXXXXXXXIGRCQQNWHHINCSI 424
+ + H A W EE + G CQQ+ HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +3
Query: 180 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 359
P+ +E +E N + F+V+ A K IK V+ +++ VAKVN +I +G KKA V
Sbjct: 7 PIVTEKTTLMMEKENKITFLVNRKATKEAIKNEVEARFNVKVAKVNMMIAKNG-KKAIVT 65
Query: 360 LARDYDALDVANKIGI 407
LA+D+ A +V ++GI
Sbjct: 66 LAKDFSAEEVGGRMGI 81
>UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L25/L23
- Methanoregula boonei (strain 6A8)
Length = 83
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 171 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 350
+K P +E AM +E+ + L F+V A K IK ++K +D V V+TL+ G+KKA
Sbjct: 4 LKHPFVTEKAMVLLENESKLQFLVDRKATKQDIKREIEKAFDQKVKSVHTLMSMHGEKKA 63
Query: 351 YVRLARDYDALDVANKIGII 410
V A ++ +++GI+
Sbjct: 64 VVSFENAKAAEEILSRLGIM 83
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 52.8 bits (121), Expect = 3e-06
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +3
Query: 171 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 350
I +P +E AM + D N L FIV T +NK I V+KLY V V T+ G KKA
Sbjct: 4 INYPFVTEKAMMLL-DENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKA 62
Query: 351 YVRLARDYDALDVANKIGII 410
+ A ++A +IG++
Sbjct: 63 VLAFEEPEAAHEIATRIGLM 82
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 52.4 bits (120), Expect = 4e-06
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 13/94 (13%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI----- 326
Y++++ PL +E A + + N +VF V SA K IKAAV+KL+++ V VNTL+
Sbjct: 16 YDVVRAPLITEKATL-LSERNQVVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQKGKV 74
Query: 327 -----RPDGK---KKAYVRLARDYDALDVANKIG 404
RP + KKAYV+LA + ++D+ K+G
Sbjct: 75 KRVKGRPGRRSDIKKAYVQLA-EGQSIDLTAKLG 107
>UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L23 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 82
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
I+K P +E A +E + L FIV A K IK ++ ++ VA V T++ G+KK
Sbjct: 2 ILKHPFVTEKATMMLEGESKLQFIVQRDATKQDIKRELESAFEQEVANVRTMMTMKGEKK 61
Query: 348 AYVRLARDYDALDVANKIGII 410
A V A A ++ +++GI+
Sbjct: 62 AIVTFADAKAAEEILSRLGIM 82
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/84 (38%), Positives = 44/84 (52%)
Frame = +3
Query: 159 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 338
A II P +E +E+ + + FIV SA+K I AV LY+ V VNT R
Sbjct: 6 ASKIILKPYITEKTFAMVENESKICFIVERSASKPEISEAVNTLYNEKVLNVNT-ARTIY 64
Query: 339 KKKAYVRLARDYDALDVANKIGII 410
KKA+V+ A D+A KIG++
Sbjct: 65 GKKAFVQFENTEKARDLATKIGML 88
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M+ Y++IK PL +E + + N + F V ANK IK AV+KL+ + VA+VNT +
Sbjct: 1 MNLYDVIKKPLITEKTTIEKDSKNVVSFEVDRDANKIEIKEAVEKLFKVEVAEVNT-VNV 59
Query: 333 DGKKKAYVR 359
GK K + R
Sbjct: 60 AGKVKRFGR 68
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
Y++I P+ +E + E +N +VF V A K IK AV+KL+D+ V VNTL+R GK
Sbjct: 9 YDVIVAPVVTEKSTMASE-HNKVVFKVQGGATKPQIKEAVEKLFDVKVKSVNTLVR-KGK 66
Query: 342 KKAY 353
KA+
Sbjct: 67 TKAF 70
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 49.6 bits (113), Expect = 3e-05
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
+++ P SE A +E +NT+V V A K IKAAV+KL+++ V VNTL+ K+
Sbjct: 10 VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKR 69
Query: 348 AYVRLARDYD 377
R+ R D
Sbjct: 70 HGQRIGRRSD 79
>UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14;
Clostridia|Rep: 50S ribosomal protein L23 - Clostridium
perfringens
Length = 97
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/66 (37%), Positives = 45/66 (68%)
Frame = +3
Query: 150 RMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 329
++ +++II+ P+ +E +M + +N FIVH +ANK IK AV++++++ VA V T+ R
Sbjct: 2 KLTSHDIIRKPVITEKSMAAMAENK-YTFIVHMAANKVQIKRAVEEVFNVKVADVKTM-R 59
Query: 330 PDGKKK 347
+GK K
Sbjct: 60 FEGKTK 65
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +3
Query: 147 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 326
N +D N+IK+P+ ++ A + + NN FIV ++K IKAA++ L+++ V K+NT
Sbjct: 3 NSLDM-NVIKYPIITDKATRLLA-NNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAH 60
Query: 327 RPDGKKK 347
P KK+
Sbjct: 61 LPKKKKR 67
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 48.4 bits (110), Expect = 7e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
++ P SE A E NNT+VF V ANK IKAAV+KL+++ V V T + GK K
Sbjct: 10 VVLAPHVSEKATLAAEVNNTVVFKVLKDANKEEIKAAVEKLFEVEVNSVRT-VNVKGKTK 68
Query: 348 AY 353
+
Sbjct: 69 RH 70
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
+ II P+ +E + + +ED N F V A+K IK AV+KL+++ V KVNT+I K
Sbjct: 7 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKK 66
Query: 342 KKAY 353
K+ +
Sbjct: 67 KRVW 70
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M Y +IK + +E + +ED N F V +SANK I AV+K++++ V VNT+
Sbjct: 1 MSNYKVIKTVVLTEKSSAAMEDQNKYTFKVASSANKIEIANAVQKIFNVKVQSVNTM-NY 59
Query: 333 DGKKK 347
GKKK
Sbjct: 60 TGKKK 64
>UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Haemophilus ducreyi
Length = 101
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
++K P SE A K E NT+VF V ANK + AV++L+++ V V T++ K+
Sbjct: 10 VLKAPHISEKATKNAEKGNTIVFKVALDANKVEVANAVQELFEVKVDSVRTVVVKGKTKR 69
Query: 348 AYVRLARDYD 377
R+ R D
Sbjct: 70 HGARMGRRSD 79
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
+IIK+P+ ++ + IE+N F V A K IK A+++L+D+ V ++NTLI KK
Sbjct: 14 DIIKYPILTDKTTQMIEENK-YSFAVEVKAKKPKIKEAIEQLFDVKVQQINTLIVKPQKK 72
Query: 345 K 347
+
Sbjct: 73 R 73
>UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellular
organisms|Rep: 50S ribosomal protein L23P - Nanoarchaeum
equitans
Length = 78
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +3
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
L +E A++ +E NT+ +V K IK +K V KVNTLI G KKAYVR
Sbjct: 4 LQTEKALRLLEQYNTITILVPREYTKSKIKEFFEKK-GYKVKKVNTLITKKGLKKAYVRF 62
Query: 363 ARDYDALDVANKIG 404
+ A VA ++G
Sbjct: 63 KEEGVARKVAEELG 76
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 46.8 bits (106), Expect = 2e-04
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IR 329
M Y+II+ P+ +EA+M + D F V + A+K IK AV+ ++D+ VA VNT+ ++
Sbjct: 1 MSLYDIIRKPIITEASMAAM-DQKKYTFEVDSRAHKLLIKQAVEAVFDVKVASVNTISVK 59
Query: 330 PDGKK 344
P K+
Sbjct: 60 PKSKR 64
>UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal protein
L23; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L23 -
Candidatus Kuenenia stuttgartiensis
Length = 93
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
MD Y++IK PL +E ++ E N+ F V ANK IK A++ ++ + V V TLI+
Sbjct: 1 MDKYDVIKGPLRTEKSVSDGEKTNSYHFDVDLKANKIQIKNAIEGIFGVKVNGVRTLIKK 60
Query: 333 DGKKK 347
+++
Sbjct: 61 SKRRR 65
>UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3;
Fusobacterium nucleatum|Rep: 50S ribosomal protein L23 -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 95
Score = 46.0 bits (104), Expect = 4e-04
Identities = 27/95 (28%), Positives = 47/95 (49%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M+ Y+IIK P+ +E ++ N F VH ANK IK A++ ++++ V V T+ +
Sbjct: 1 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAIETIFNVKVEDVATINKK 60
Query: 333 DGKKKAYVRLARDYDALDVANKIGII*TVPYFLRI 437
K+ +RL + K+ T+ YF +
Sbjct: 61 PITKRHGMRLYKTQAKKKAIVKLAKENTITYFKEV 95
>UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candidatus
Phytoplasma|Rep: 50S ribosomal protein L23 - Onion
yellows phytoplasma
Length = 96
Score = 45.2 bits (102), Expect = 7e-04
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDG 338
Y+++K P+ +E K IE N F V +ANK IK A++ ++ + V VNT + P
Sbjct: 5 YDLVKAPIITELTNKLIERQNKYTFKVAKTANKVEIKKALESIFQVKVLSVNTRNVLPQF 64
Query: 339 KKK 347
K+K
Sbjct: 65 KRK 67
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 45.2 bits (102), Expect = 7e-04
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M+AY+II P +E +M+ L FIV SA+K I AV+ ++D+ V KVN
Sbjct: 1 MNAYDIIIQPWLTEKSMEARSTQQRLEFIVRRSASKDDIAKAVETIFDVEVEKVNVRNSK 60
Query: 333 DGK 341
GK
Sbjct: 61 HGK 63
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 45.2 bits (102), Expect = 7e-04
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = +3
Query: 153 MDAYNIIKFP-LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 329
MD N++ P LT + ++ + VF+V+ A+K +K A + +Y I KVNTLIR
Sbjct: 1 MDVTNVLLKPVLTEKVYFNQMGETKKYVFVVNPKASKTRVKLAFELVYGIKPLKVNTLIR 60
Query: 330 PDGKKKAYVRLARDYDALDVANKIGII*TVPYFLRIKI 443
K +R + L K+ +I T+P + I +
Sbjct: 61 ----KPTTIRGGSRFPGLSKLEKLAVI-TLPKGIAISV 93
>UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3;
Bacteria|Rep: 50S ribosomal protein L23 - uncultured
bacterium 562
Length = 98
Score = 44.8 bits (101), Expect = 9e-04
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
+ +IK P+ +E + + E +VF V +ANK IK AV++L+ + V KV T I GK
Sbjct: 7 FTLIKSPIVTEKSARVGESLKQIVFKVDLTANKREIKKAVEELFKVEVTKVTTSI-VKGK 65
Query: 342 KK 347
+K
Sbjct: 66 RK 67
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 44.4 bits (100), Expect = 0.001
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +3
Query: 159 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 338
AY+IIK P+ +E +M+ E F V SANK I AV++++ + V KVNTL G
Sbjct: 5 AYDIIKRPVITEQSMEMTEMKR-YTFEVAKSANKIEIAKAVEEIFGVKVVKVNTL-NMQG 62
Query: 339 KKK 347
K+K
Sbjct: 63 KEK 65
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
++IK+P+ +E + IE N F V A+K IK+AV+ L+D+ V VNT +P K+
Sbjct: 10 DLIKYPILTEKTSRLIEQNQ-YSFAVDRKADKISIKSAVEALFDVQVVAVNTANQPLKKR 68
Query: 345 K 347
+
Sbjct: 69 R 69
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGK 341
+II P+ +E K+ E N F+V ANK IK AV+ Y + + VNT+ +RPD
Sbjct: 2 SIIIRPIVTEKVTKESEVLNRFGFVVDKKANKVQIKKAVEAAYGVTIVSVNTMNVRPDRT 61
Query: 342 KK 347
K
Sbjct: 62 TK 63
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 329
D +II P+ SE + + D NT F+V +ANK IK A+++++ + V VNT+ R
Sbjct: 8 DPRDIILAPVVSEKSYGLL-DQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 141 KRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 320
K+ ++ ++++ P+ +E A+ + + VF V+ ANK+ +K AV+KL+++ V KVN
Sbjct: 2 KQEKLSLHDVLIRPIITEKALI-LREQRKYVFEVNPLANKNLVKEAVEKLFNVKVEKVNI 60
Query: 321 L-IRPDGKKK 347
L ++P K++
Sbjct: 61 LNMKPKPKRR 70
>UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23;
Firmicutes|Rep: 50S ribosomal protein L23 - Dorea
longicatena DSM 13814
Length = 101
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLY-DINVAKVNTLIRPDG 338
Y++I P+ +E +M+ + + F+VH A K IK AV+K++ V KVNT+ DG
Sbjct: 7 YDVILKPVVTEKSMELMGEKK-YTFLVHPEATKSQIKEAVEKMFTGTKVEKVNTM-NNDG 64
Query: 339 KKK 347
KKK
Sbjct: 65 KKK 67
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 43.2 bits (97), Expect = 0.003
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
+IK LT + + + F+V+ ANK++IK A K +Y + VNT I KK
Sbjct: 7 LIKPILTEKTYGIMMSEPRKYTFLVNAKANKNYIKQAFKAIYGVTPIAVNTKI----KKP 62
Query: 348 AYVRLARDYDALDVANKIGII*TVPYFLRIKIYXXK 455
A VR KI II TVP+ + + I K
Sbjct: 63 ARVRTGTQNPGYSRLEKIAII-TVPFGVEVAITGEK 97
>UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L23 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 103
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +3
Query: 144 RNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 323
R M AY+II P+ +E + E N VF V+ ANK + AA+K+L+++ N L
Sbjct: 3 RISMKAYDIIVSPMLTEKTNTQRESINVYVFKVNKRANKKEVGAAIKELFNVTPVSCNLL 62
Query: 324 IRPDGKKKAYVRLAR 368
+ K KA V ++R
Sbjct: 63 ---NIKSKAKVVVSR 74
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
++IK+P+ + + + + NN +F V K IK +++ +++NV VNT RP KK
Sbjct: 3 DLIKYPVINFKSYRALVLNNQYMFNVDLRLTKPQIKKLIEQYFEVNVISVNT-HRPPRKK 61
Query: 345 KAYVRLARDY 374
+ Y++ + Y
Sbjct: 62 RLYIQTSPGY 71
>UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L23 - Mycoplasma
mobile
Length = 213
Score = 42.3 bits (95), Expect = 0.005
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M+ IIK+PL +E + K + N VF V A K IK A++ ++++ V K+N P
Sbjct: 1 MNHNEIIKYPLLTEKSYKTMA-QNVYVFAVDRRARKIEIKDAIEFIFEVKVEKINLFNVP 59
Query: 333 DGKKK 347
+KK
Sbjct: 60 QKEKK 64
>UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26;
Firmicutes|Rep: 50S ribosomal protein L23 - Clostridium
acetobutylicum
Length = 98
Score = 41.5 bits (93), Expect = 0.008
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 320
++++II+ P+ +E +M ++ D FIV ANK IK A+++++ + V KVNT
Sbjct: 4 NSHDIIRKPVITEKSMAEMADKK-YTFIVDPHANKVQIKKAIEEVFGVKVEKVNT 57
>UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2;
Wolbachia|Rep: 50S ribosomal protein L23 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 95
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRP 332
NI+K P+ +E A E N V + NKH IK+A++ L+++ V+ +N + ++P
Sbjct: 6 NIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKP 62
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 41.5 bits (93), Expect = 0.008
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 159 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDG 338
AY++I P+ SE A + F VH A K IK AV+ + + V KVNTL G
Sbjct: 4 AYDVILAPVLSEKAYAGFAEGK-YTFWVHPKATKTEIKNAVETAFKVKVVKVNTL-HVRG 61
Query: 339 KKK 347
KKK
Sbjct: 62 KKK 64
>UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55;
Alphaproteobacteria|Rep: 50S ribosomal protein L23 -
Silicibacter pomeroyi
Length = 98
Score = 41.1 bits (92), Expect = 0.011
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
Y++I+ P+ +E + E N +VF V +NK IK AV+ L+ + V VNT I GK
Sbjct: 8 YDVIRKPIITEKSTMASE-NGAVVFEVSIDSNKPQIKEAVESLFGVKVKAVNTTI-TKGK 65
Query: 342 KKAY 353
K +
Sbjct: 66 VKRF 69
>UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellular
organisms|Rep: 50S ribosomal protein L23 - Gloeobacter
violaceus
Length = 100
Score = 41.1 bits (92), Expect = 0.011
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
+II+ PL +E + +E+N L F V ANK I A+++L+ + V KVNT P ++
Sbjct: 11 DIIRRPLITEKGTRLLEENKYL-FEVTPGANKIQIAQAIEELFSVKVTKVNTFNPPARQR 69
Query: 345 K 347
+
Sbjct: 70 R 70
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 40.7 bits (91), Expect = 0.015
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = +3
Query: 147 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 326
+++ Y+ I P+ +E + + N +VF V +ANK ++K ++K++ +NV K+N +
Sbjct: 2 DKIHLYDKILSPMVTEKTTN-LSEQNKIVFKVPRAANKTNLKKNIEKIFKVNVTKINIIN 60
Query: 327 RPDGKKKA 350
+ + K A
Sbjct: 61 KQNRTKVA 68
>UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1;
Cenarchaeum symbiosum|Rep: 50S ribosomal protein L23 -
Cenarchaeum symbiosum
Length = 80
Score = 40.7 bits (91), Expect = 0.015
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +3
Query: 180 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 359
P +E +E + + FIV +A+K I A+ +Y VNT R KKA+V+
Sbjct: 5 PHVTEKTFAMVERESKVCFIVRNTASKPEIAEAISIMYGEKATGVNT-ARTIYGKKAFVQ 63
Query: 360 LARDYDALDVANKIGII 410
A D+A KIG++
Sbjct: 64 FGNVEKARDLATKIGML 80
>UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellular
organisms|Rep: 50S ribosomal protein L23 -
Prochlorococcus marinus
Length = 102
Score = 40.3 bits (90), Expect = 0.019
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
++I+ PL +E A K + D N F V A K IKAAV+KL+D+ V ++T+ P
Sbjct: 11 DVIRRPLITEKATKGL-DINQYTFEVDHRAAKPDIKAAVEKLFDVKVIGISTMNPP 65
>UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2;
Deltaproteobacteria|Rep: 50S ribosomal protein L23 -
Desulfotalea psychrophila
Length = 95
Score = 40.3 bits (90), Expect = 0.019
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 320
Y ++K P+ +E A E + +VF VH +NK IK A++ ++D+ V V T
Sbjct: 5 YGVLKGPVLTEKAAILQEIDGQVVFKVHPKSNKIEIKRAIELMFDVKVKDVRT 57
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 39.9 bits (89), Expect = 0.025
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 335
D +++ P+ SE + + D N F+V +NK IK AV+ ++ + V VNT+ R
Sbjct: 45 DPRDVLLKPVVSEKSYALL-DENKYTFVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR-Q 102
Query: 336 GKKK 347
GK+K
Sbjct: 103 GKRK 106
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 39.9 bits (89), Expect = 0.025
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
Y++I P+ +E + E +F+V +ANK++I A++ ++++NV KVN +I GK
Sbjct: 6 YDLIVKPVVTEKSTLASECKK-YIFLVQRNANKYNISKAIEGIFNVNVIKVN-IINMIGK 63
Query: 342 KKAY 353
K +
Sbjct: 64 TKRF 67
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 39.9 bits (89), Expect = 0.025
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Frame = +3
Query: 180 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-----IRPDGK- 341
P S+ + N+T+VF V ANK +K AV+KL+++ V VN L R G+
Sbjct: 14 PHVSDKTYGLSDANSTIVFEVARFANKQDVKNAVEKLFEVKVESVNILNVKGKARRFGRV 73
Query: 342 -------KKAYVRLARDYD 377
KKAYV+LA +D
Sbjct: 74 EGGTKAWKKAYVKLAEGHD 92
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 39.5 bits (88), Expect = 0.034
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -3
Query: 199 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 59
A S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L23 - Mariprofundus ferrooxydans PV-1
Length = 99
Score = 39.5 bits (88), Expect = 0.034
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +3
Query: 162 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 341
+NI++ P+ +E + N F V A+K +KAA++ ++++NV KV + P
Sbjct: 8 FNILRQPVITEKSYTATGAANQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVINMPSKP 67
Query: 342 KK 347
K+
Sbjct: 68 KR 69
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 39.1 bits (87), Expect = 0.044
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 204 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 323
K E+ N ++F S K IK +K LYD+NV KVNT+
Sbjct: 33 KTFENTNKIMFKTDCSVGKTDIKTYMKALYDVNVDKVNTI 72
>UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L23 - candidate division TM7 genomosp. GTL1
Length = 102
Score = 38.7 bits (86), Expect = 0.059
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +3
Query: 180 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 326
P SE A NT VF+V NK I AV Y + VAKV TL+
Sbjct: 8 PRVSEKAYGLASVGNTYVFVVPIKVNKQQIADAVATQYGVKVAKVTTLV 56
>UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
penetrans|Rep: 50S ribosomal protein L23 - Mycoplasma
penetrans
Length = 138
Score = 38.3 bits (85), Expect = 0.077
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMK-KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 329
MD ++I PL SE + + ED VF V+ +ANK+ I A + +Y I KVN +
Sbjct: 1 MDLLSVIIKPLHSEKSYSLRNEDIKKYVFEVNRNANKYEISLAFQLIYGIVPNKVNVV-- 58
Query: 330 PDGKKKAYVRLARDYDALDVANKIGII*TVPYFLRIKI 443
+K R + A KI I T+P+ + I+I
Sbjct: 59 --NRKPTPTRTGTRNPGMTKAKKIAYI-TLPHGVDIQI 93
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 38.3 bits (85), Expect = 0.077
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
IIK PL +E + N F+V ANK IK V+ LY++ V VNT ++ GK K
Sbjct: 4 IIK-PLVTEKMTAITDKLNRFGFVVRPDANKLEIKKEVEALYNVTVVDVNT-VKYAGKNK 61
Query: 348 A 350
+
Sbjct: 62 S 62
>UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2;
Flavobacteriaceae|Rep: 50S ribosomal protein L23 -
Psychroflexus torquis ATCC 700755
Length = 106
Score = 37.9 bits (84), Expect = 0.10
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 323
IIK LT + A+ + E N FIV +ANK IK+AV+ ++++V+KV T+
Sbjct: 6 IIKPILTEKMAIMQ-ERQNKYAFIVSHNANKIQIKSAVENKFNVSVSKVATM 56
>UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 37.1 bits (82), Expect = 0.18
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIED-NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
IIK P+ SE E + F V +ANK IK AV+ +Y++ V VNT+ R DGK+
Sbjct: 4 IIK-PIISEKMTAVTEKMSERYGFRVSPNANKIEIKKAVEAMYNVKVEDVNTM-RYDGKR 61
Query: 345 K 347
K
Sbjct: 62 K 62
>UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L23 - Mycoplasma
synoviae (strain 53)
Length = 158
Score = 37.1 bits (82), Expect = 0.18
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M+ +I+ P+ +E + + D F V ANKH IK AV+ ++ + V VNT I+
Sbjct: 1 MELTRVIQAPIITEKTDRLLLDRK-YTFKVDYFANKHQIKQAVETIFKVEVVDVNT-IKV 58
Query: 333 DGKKKAYVRLA 365
K K R A
Sbjct: 59 GKKPKKLGRFA 69
>UniRef50_Q82X86 Cluster: 50S ribosomal protein L23; n=5;
Betaproteobacteria|Rep: 50S ribosomal protein L23 -
Nitrosomonas europaea
Length = 111
Score = 36.7 bits (81), Expect = 0.24
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 159 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLY---DINVAKVNTLIR 329
A +IK P SE + E ++F V ANK IK+A+++++ +I V V ++
Sbjct: 11 ALEVIKAPQISEKSTFIAEKTKQIIFYVSRDANKTEIKSAIEQIWRSQNIQVKSVQ-VVN 69
Query: 330 PDGKKKAYVR 359
GKKK + R
Sbjct: 70 VKGKKKRFGR 79
>UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candidatus
Blochmannia floridanus|Rep: 50S ribosomal protein L23 -
Blochmannia floridanus
Length = 99
Score = 36.7 bits (81), Expect = 0.24
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 168 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
+IK P SE + ++ NN +V V K I+ AV L+ + + K+N L+ GK K
Sbjct: 9 VIKAPHVSEKSSIALDKNNVIVLKVVNYVTKQDIRHAVCMLFSVKIKKINVLM-VSGKSK 67
>UniRef50_P06390 Cluster: Chloroplast 50S ribosomal protein L23;
n=13; Viridiplantae|Rep: Chloroplast 50S ribosomal
protein L23 - Marchantia polymorpha (Liverwort)
Length = 91
Score = 36.7 bits (81), Expect = 0.24
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
N +K+P+ +E ++ +E N F V+ +NK IK ++ +++ V VN+ P KK
Sbjct: 2 NQVKYPVLTEKTIRLLEKNQ-YSFDVNIDSNKTQIKKWIELFFNVKVISVNSHRLPKKKK 60
Query: 345 K 347
K
Sbjct: 61 K 61
>UniRef50_A5K9F3 Cluster: Phosphomethylpyrimidine kinase, putative;
n=2; Plasmodium|Rep: Phosphomethylpyrimidine kinase,
putative - Plasmodium vivax
Length = 321
Score = 36.3 bits (80), Expect = 0.31
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 413 LYDANFVGNVQCVIISSESYVRFLL-TIRPDECVDFSNIY----IIEFLDCSLDM 264
++D FV + C+++ + Y++F L I P C+ N Y I+E LDC +D+
Sbjct: 109 VFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYECKVILEALDCQMDL 163
>UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56;
Firmicutes|Rep: 50S ribosomal protein L23 - Bacillus
anthracis
Length = 96
Score = 35.5 bits (78), Expect = 0.55
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRP 332
D +IIK P+ +E +M+ + + F V +NK +K A++ ++ + V KVN + +P
Sbjct: 3 DPRDIIKRPVITERSMEMMAEKK-YTFDVDVKSNKTEVKDALEAIFGVKVEKVNIMNYKP 61
Query: 333 DGKK 344
K+
Sbjct: 62 KAKR 65
>UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L23 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 105
Score = 35.1 bits (77), Expect = 0.72
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEA--AMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 326
M+ +I P T+E +++ ++ TL FIV +ANK+ I+ A ++ + K+ T
Sbjct: 1 MELTRVILHPYTTEKTYSIRNKSEHETLTFIVDKNANKYQIREAFIAIFGLKPLKIRTTN 60
Query: 327 RPDGK 341
R K
Sbjct: 61 RRPAK 65
>UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2;
Theileria|Rep: Ribosomal protein L223, putative -
Theileria parva
Length = 252
Score = 35.1 bits (77), Expect = 0.72
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 216 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR-PDGKKKAYVRLARDY 374
+ N L V + K I+ ++KLYD V KVNTLI+ P K+ RL + Y
Sbjct: 34 ERNRLALRVPINLTKFEIREYLRKLYDAKVIKVNTLIKIPRIKRDFSSRLPKYY 87
>UniRef50_Q2LQ99 Cluster: 50S ribosomal protein L23; n=4;
Bacteria|Rep: 50S ribosomal protein L23 - Syntrophus
aciditrophicus (strain SB)
Length = 96
Score = 35.1 bits (77), Expect = 0.72
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 156 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPD 335
+ + I+K L +E + + ++ N F V ANK I+ AV++L + V V+ +I
Sbjct: 3 ELHQIVKRMLVTEKSTLEKDEKNKYYFEVDRRANKIEIRKAVERLLKVTVDDVH-VINIK 61
Query: 336 GKKKAYVRL 362
GKKK R+
Sbjct: 62 GKKKRTGRI 70
>UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Scenedesmus obliquus|Rep: Chloroplast 50S ribosomal
protein L23 - Scenedesmus obliquus
Length = 90
Score = 35.1 bits (77), Expect = 0.72
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
+ IK+P+T+E + + N F V K IK + L+ +NV +NT RP KK
Sbjct: 4 DFIKYPVTTEKSYLSMFKNKQYTFDVDLRLTKPQIKKLFETLFGVNVIGINT-HRPPRKK 62
>UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n=5;
Plasmodium|Rep: Splicing factor 3a subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 233
Score = 34.7 bits (76), Expect = 0.95
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 219 NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARD-YDALDVAN 395
NN ++ HT KH + A + L + N N L +P + + V++ + YD V N
Sbjct: 64 NNESSYLCHTQGKKHQMNLAQRLLKEKNEMTTNRLNKPVSEPRKIVKIGKPRYDVTRVRN 123
Query: 396 K 398
K
Sbjct: 124 K 124
>UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4;
Mollicutes|Rep: 50S ribosomal protein L23 - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 94
Score = 34.7 bits (76), Expect = 0.95
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M ++K P+ +E + +DN F+V ANK IK ++++++ V V T I
Sbjct: 1 MHITEVLKKPVLTEKSFAGHKDN-VYTFLVDKKANKVQIKKTFEEIFEVKVESVRT-INY 58
Query: 333 DGKKK 347
D K+K
Sbjct: 59 DAKEK 63
>UniRef50_Q4PG94 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 646
Score = 34.3 bits (75), Expect = 1.3
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 219 NNTLVFIVHTSANKHHIKAAVKK-LYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVAN 395
+++L+ I+HTSA H I +K L D ++ K I+ D ++L RDY A+D N
Sbjct: 237 SSSLILIIHTSAMSHRIPPLLKHILQDPSIVKTGVAIKNDA-----LKLQRDY-AIDARN 290
Query: 396 KI 401
+
Sbjct: 291 VV 292
>UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: 50S ribosomal
protein L23 - Stigmatella aurantiaca DW4/3-1
Length = 99
Score = 33.9 bits (74), Expect = 1.7
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 326
M+ +++IK PL +E K E FIV A K + AV+ L+ ++V V T I
Sbjct: 1 MNIHDVIKGPLITEKLDKAREKFRQYSFIVDKKATKIDVARAVENLFKVSVEGVRTNI 58
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 1.7
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 176
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 149
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 149
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 9 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 149
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 18 RKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 149
+K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 3 KKIRRQKNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 46
>UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 964
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -2
Query: 296 IIEFLDCSLDMVLVCTCVNNKDQGVVIFNLLHCCFRREREFN-DVVGIHA-ISLRQRLPW 123
++E +C + V V V K + VV+ HC R + N D+ I RQ LPW
Sbjct: 119 VLECYNCGNENVFVLGFVTAKLENVVVLLCRHCIQRSPSDANWDIREWQTLIEDRQFLPW 178
Query: 122 VFRVPRR 102
+ +PRR
Sbjct: 179 LVPIPRR 185
>UniRef50_Q6F1Z2 Cluster: 50S ribosomal protein L23; n=3;
Firmicutes|Rep: 50S ribosomal protein L23 - Mesoplasma
florum (Acholeplasma florum)
Length = 94
Score = 33.9 bits (74), Expect = 1.7
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M +IK P+ +E + N F+V ANK IK ++++++ V V T+
Sbjct: 1 MHLTEVIKKPVLTEKSFLG-HANGVYTFLVDRRANKVQIKKTFEEIFEVKVESVRTM-NY 58
Query: 333 DGKKK 347
DGK+K
Sbjct: 59 DGKEK 63
>UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal
protein L23, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L23, partial -
Ornithorhynchus anatinus
Length = 75
Score = 33.5 bits (73), Expect = 2.2
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +3
Query: 171 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 347
IK + SE K E VF V +ANK IK V+ ++++ V VNTL KK+
Sbjct: 5 IKEAVLSEKTFAKAEQK-VYVFRVAKNANKLKIKQDVEYIFNVKVKAVNTLNEAKQKKR 62
>UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 401
Score = 33.5 bits (73), Expect = 2.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 389 NVQCVIISSESYVRFLLTI-RPDECVDFSNIYIIEFLDCSLDMVLVCTCVNNKDQ 228
N+ + +S+ S + L P +D SNI +E+L+CS L C+N DQ
Sbjct: 274 NLSVIDVSANSNITLLFCYSNPITTLDVSNITNLEYLNCSSCPNLSTVCINTTDQ 328
>UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 73
Score = 33.1 bits (72), Expect = 2.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 39 HGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 218
H K RK+ N+ ++PK F P P PR SL + D I + + + + + +
Sbjct: 6 HKKHCRKLYNTYSTKKPKRFFKPSRPPPPRNSLVDDDDDDDDKTITYSIGNLETLLLLLN 65
Query: 219 NN 224
NN
Sbjct: 66 NN 67
>UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces
cerevisiae YNL249c MPA43; n=1; Kluyveromyces lactis|Rep:
Similar to sp|P53583 Saccharomyces cerevisiae YNL249c
MPA43 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 516
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 311 FSNIYIIEFLDCSLDMVLVCTCV--NNKDQGVVIFNLLH 201
F+ +YI E+ CSL + C+ V KD+ ++ FNL+H
Sbjct: 60 FNTLYIQEYNICSLGVGATCSMVVGKQKDENLIPFNLIH 98
>UniRef50_A1AX35 Cluster: TRNA delta(2)-isopentenylpyrophosphate
transferase; n=2; sulfur-oxidizing symbionts|Rep: TRNA
delta(2)-isopentenylpyrophosphate transferase - Ruthia
magnifica subsp. Calyptogena magnifica
Length = 305
Score = 32.7 bits (71), Expect = 3.8
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 117 KYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIV-HTSANKHHIKAAVKKLY 293
KYP + N D+Y+ F + A +K NN L +V TS H ++ + KL
Sbjct: 61 KYPHHLIDICNPEDSYSAFNFARNANAQIKTAFANNELPILVGGTSFYFHALEYGLSKLP 120
Query: 294 DI---NVAKVNTLIRPDGKKKAYVRLARDYDALDV--ANKI 401
+ + K N L+ K K ++L RD +D+ AN+I
Sbjct: 121 ESTPESKEKFNQLL----KSKGTIKLHRDLKRIDLQAANRI 157
>UniRef50_Q9TJQ6 Cluster: Plastid 50S ribosomal protein L23; n=2;
Chlorellaceae|Rep: Plastid 50S ribosomal protein L23 -
Prototheca wickerhamii
Length = 86
Score = 32.7 bits (71), Expect = 3.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKK 344
N++++P+ ++ +NN F + K IK V++ ++I V +NT RP K
Sbjct: 4 NLLQYPVIKTPKATRLLENNQYSFDIDKKLTKPQIKKLVEEYFNIKVLAINT-HRPPRKI 62
Query: 345 K 347
K
Sbjct: 63 K 63
>UniRef50_UPI0000E49402 Cluster: PREDICTED: similar to alpha 10
subunit of nicotinic acetylcholine receptor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
alpha 10 subunit of nicotinic acetylcholine receptor -
Strongylocentrotus purpuratus
Length = 473
Score = 32.3 bits (70), Expect = 5.1
Identities = 27/115 (23%), Positives = 52/115 (45%)
Frame = -2
Query: 410 YDANFVGNVQCVIISSESYVRFLLTIRPDECVDFSNIYIIEFLDCSLDMVLVCTCVNNKD 231
Y N +G CV+IS + + F + P + + + I L ++ ++LV +
Sbjct: 233 YFINLLG--PCVLISLITVLDFFM---PADAGEKVTLGITILLALTVFLLLVAETMPPTS 287
Query: 230 QGVVIFNLLHCCFRREREFNDVVGIHAISLRQRLPWVFRVPRRFKRLGSAEMHRV 66
+ V + + C + V+ ++ +SL RLP RVPR K+ + + R+
Sbjct: 288 EVVPLIAQYYACTIVLVSLSTVMTVYVLSLHYRLPGTNRVPRGMKKFAFSFLARI 342
>UniRef50_A4WCZ5 Cluster: ImpA domain protein; n=3; Enterobacter sp.
638|Rep: ImpA domain protein - Enterobacter sp. 638
Length = 791
Score = 32.3 bits (70), Expect = 5.1
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +1
Query: 217 ITTPWSLLFTQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRRKRTYDSLEIMTHWTLPT 396
IT W TQ + TIS LQS S + L +T S G + TY + I+ LP
Sbjct: 544 ITECWDGWMTQEEIETISELQSIASKLDQQLSTTISGG-WEEGRLTYRAESIINANPLPA 602
Query: 397 KLASYKL 417
++ Y+L
Sbjct: 603 EIPRYEL 609
>UniRef50_Q22EY1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 138
Score = 32.3 bits (70), Expect = 5.1
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +3
Query: 132 SLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAK 311
+ PK +++ + + + K +E NNT+V K IK + KLY + + K
Sbjct: 37 NFPKEQKVEKF--CNWEMVVHRGEKPLE-NNTVVLKCDPKLAKPEIKQYLTKLYGLELNK 93
Query: 312 VNTLIRPDGKKKAYVRLARDYDALDVANKIGII*T--VPYFLRIK 440
VNT +R GK K + L + + D ++ T P++ +I+
Sbjct: 94 VNT-VRYTGKLKNSI-LRKTFKTKDFKKVYAVLKTEVEPFYQKIE 136
>UniRef50_P78347 Cluster: General transcription factor II-I; n=77;
Tetrapoda|Rep: General transcription factor II-I - Homo
sapiens (Human)
Length = 998
Score = 32.3 bits (70), Expect = 5.1
Identities = 31/106 (29%), Positives = 50/106 (47%)
Frame = +3
Query: 51 VRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 230
V + V FRRP TF PR K RN+ IIK P E A+K+ + +
Sbjct: 771 VEGLPEGVPFRRPSTFGIPRLEKI------LRNKAKIKFIIKKPEMFETAIKESTSSKSP 824
Query: 231 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLAR 368
+++S N + + V+ D+N+ +V T+ D ++ + V AR
Sbjct: 825 PRKINSSPNVNTTASGVE---DLNIIQV-TIPDDDNERLSKVEKAR 866
>UniRef50_Q9NW15-2 Cluster: Isoform 2 of Q9NW15 ; n=3;
Catarrhini|Rep: Isoform 2 of Q9NW15 - Homo sapiens
(Human)
Length = 470
Score = 31.9 bits (69), Expect = 6.7
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 105 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN-NTLVFIVHTSANKHHIKAAV 281
P+ YP KSL +R I FPL A+KK+ED T + + H +++A
Sbjct: 147 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIENHRLESAY 206
Query: 282 KKLYDINVAKVNTL 323
+ + V N L
Sbjct: 207 QNHLILKVLVFNFL 220
>UniRef50_Q2ST58 Cluster: Lipoprotein, putative; n=3;
Mycoplasma|Rep: Lipoprotein, putative - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 356
Score = 31.9 bits (69), Expect = 6.7
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 141 KRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDI---NVAK 311
K+ + A N++ + + + K+E+N +F+V NK K V+ L +I V K
Sbjct: 121 KKVKPTAVNVLGYEEIKKETVDKLENNLKTIFLVFKDNNKESEKLEVELLPEIKNNQVIK 180
Query: 312 VNTLIRPDGKKKAYVRLARDYDALDVANK 398
N L +K ++LA +++ K
Sbjct: 181 DNVLYLEHLEKPENLKLANQKSIVEILRK 209
>UniRef50_A7CUV3 Cluster: Ribosomal protein L25/L23; n=1;
Opitutaceae bacterium TAV2|Rep: Ribosomal protein
L25/L23 - Opitutaceae bacterium TAV2
Length = 93
Score = 31.9 bits (69), Expect = 6.7
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 153 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 332
M A ++K +E + + F V +A KH I AAV++ + ++V +VN +I
Sbjct: 1 MKADQVLKMVRLTEKSNLLSAELGQYTFQVDRAAGKHAIAAAVEQAFKVSVTRVN-VINT 59
Query: 333 DGKKK 347
GK K
Sbjct: 60 AGKAK 64
>UniRef50_Q4UCB5 Cluster: 50S ribosomal protein L12, putative; n=2;
Theileria|Rep: 50S ribosomal protein L12, putative -
Theileria annulata
Length = 275
Score = 31.9 bits (69), Expect = 6.7
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 129 KSLPKRNRMDAYNIIK--FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 290
K + K R+D++ +K FP S + +KKI D +L F+V T ++ + +KKL
Sbjct: 212 KEIEKDKRIDSFKTLKEYFPDRSASEIKKIMD--SLPFVVKTVTSQREAEDIIKKL 265
>UniRef50_Q7RC77 Cluster: NAD(P) transhydrogenase beta subunit,
putative; n=8; cellular organisms|Rep: NAD(P)
transhydrogenase beta subunit, putative - Plasmodium
yoelii yoelii
Length = 1201
Score = 31.5 bits (68), Expect = 8.9
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 117 KYPRKSLPKRNRMDAYNII-KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLY 293
KY + + + + NII K SE + KIE N TL+ + S N+ +K AV+
Sbjct: 716 KYGAEIVSRESIFSKSNIILKVDPPSEKFINKIESNTTLISYLWPSINQDLLKQAVENNE 775
Query: 294 DINVAKVN 317
D K N
Sbjct: 776 DDKTKKSN 783
>UniRef50_A5DHF9 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1287
Score = 31.5 bits (68), Expect = 8.9
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 250 VQTSTISRLQSRNSMI*MLLKSTHSSGLMVRRKRTYDS---LEIMTHWTLPTKLASYKLF 420
++T + +L RN +L+ T + + V R R ++ + IM + P+KL+SY
Sbjct: 436 LKTKPVVKLSDRNRESKLLVNGTKNVAISVDRSRIQEADWPITIMIEYLSPSKLSSYNFS 495
Query: 421 HIF 429
+F
Sbjct: 496 RVF 498
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,866,656
Number of Sequences: 1657284
Number of extensions: 8142447
Number of successful extensions: 25061
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 24370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25024
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -