Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20c24
(456 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 227 5e-60
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 227 5e-60
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 225 2e-59
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 221 5e-58
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 58 6e-09
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 3.9
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 3.9
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 3.9
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 3.9
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 3.9
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 3.9
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 3.9
EF078695-1|ABK63801.1| 786|Drosophila melanogaster Yurt delta p... 28 5.2
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro... 28 5.2
BT015265-1|AAT94494.1| 972|Drosophila melanogaster LD33734p pro... 28 5.2
AY061133-1|AAL28681.1| 729|Drosophila melanogaster LD11531p pro... 28 5.2
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P... 28 5.2
AE014297-1692|AAF54951.1| 972|Drosophila melanogaster CG9764-PA... 28 5.2
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 227 bits (555), Expect = 5e-60
Identities = 104/136 (76%), Positives = 119/136 (87%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 363 ARDYDALDVANKIGII 410
ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 227 bits (555), Expect = 5e-60
Identities = 104/136 (76%), Positives = 119/136 (87%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 363 ARDYDALDVANKIGII 410
ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 225 bits (551), Expect = 2e-59
Identities = 104/136 (76%), Positives = 118/136 (86%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+EAAMKKIEDNNTLVF+ H ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 363 ARDYDALDVANKIGII 410
ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 221 bits (539), Expect = 5e-58
Identities = 103/136 (75%), Positives = 118/136 (86%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 363 ARDYDALDVANKIGII 410
ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/102 (32%), Positives = 52/102 (50%)
Frame = +2
Query: 119 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 298
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 299 KCC*SQHTHQA*W*EESVXXXXXXXXXIGRCQQNWHHINCSI 424
+ + H A W EE + G CQQ+ HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 218
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>EF078695-1|ABK63801.1| 786|Drosophila melanogaster Yurt delta
protein.
Length = 786
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 320
+I+K P S A + I D N++ ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 321 LIRPDGKKKAYVRLAR 368
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p protein.
Length = 1761
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 211 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 309
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1124 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1156
>BT015265-1|AAT94494.1| 972|Drosophila melanogaster LD33734p
protein.
Length = 972
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 320
+I+K P S A + I D N++ ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 321 LIRPDGKKKAYVRLAR 368
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
>AY061133-1|AAL28681.1| 729|Drosophila melanogaster LD11531p
protein.
Length = 729
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 320
+I+K P S A + I D N++ ++ + + H +K+L + N +A VNT
Sbjct: 360 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 419
Query: 321 LIRPDGKKKAYVRLAR 368
P G K + AR
Sbjct: 420 TALPPGNIKCNILKAR 435
>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
isoform C protein.
Length = 1997
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 211 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 309
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1360 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1392
>AE014297-1692|AAF54951.1| 972|Drosophila melanogaster CG9764-PA
protein.
Length = 972
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +3
Query: 165 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 320
+I+K P S A + I D N++ ++ + + H +K+L + N +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662
Query: 321 LIRPDGKKKAYVRLAR 368
P G K + AR
Sbjct: 663 TALPPGNIKCNILKAR 678
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,022,539
Number of Sequences: 53049
Number of extensions: 396100
Number of successful extensions: 1257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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