Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20c24
(456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 172 1e-43
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 170 4e-43
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 31 0.53
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 31 0.53
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 31 0.53
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical ... 29 1.6
Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical pr... 29 2.1
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 2.1
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 29 2.1
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 2.1
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 2.1
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 28 2.8
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 28 2.8
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 28 2.8
AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical... 27 4.9
AF003151-9|AAK18911.1| 168|Caenorhabditis elegans Hypothetical ... 27 4.9
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 6.5
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 6.5
Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical ... 27 8.6
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 172 bits (418), Expect = 1e-43
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
AL A++KVVKG+ R++R SVHFRRP T + R ++PRKS PK ++MD + II+ P
Sbjct: 12 ALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHP 71
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
LT+E+AMKKIE++NTLVFIV ANK+ IK AV KLY++ KVNTLI P +KKAYVRL
Sbjct: 72 LTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRL 131
Query: 363 ARDYDALDVANKIGII 410
DYDALDVANKIG+I
Sbjct: 132 TADYDALDVANKIGVI 147
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 170 bits (414), Expect = 4e-43
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +3
Query: 3 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 182
A++A++ VVKG + +R SVHFRRPKT R P+Y RKS P R+++D++ +IK P
Sbjct: 11 AIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAP 70
Query: 183 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 362
T+E++MKKIED+NTLVFIV ANKHHIK AV LY++ KVNTLI P +KKAYVRL
Sbjct: 71 HTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRL 130
Query: 363 ARDYDALDVANKIGII 410
A DYDALDVANKIG I
Sbjct: 131 ASDYDALDVANKIGFI 146
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 200
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 490
Query: 201 MKKIEDNNTLVFIVH 245
M I++N L + H
Sbjct: 491 MADIQNNEYLEYGTH 505
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 200
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 831
Query: 201 MKKIEDNNTLVFIVH 245
M I++N L + H
Sbjct: 832 MADIQNNEYLEYGTH 846
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 200
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 437 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 490
Query: 201 MKKIEDNNTLVFIVH 245
M I++N L + H
Sbjct: 491 MADIQNNEYLEYGTH 505
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 VVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAA 200
V+ G HG R I+N++ R P F P H P P+++ +D + + +T+E
Sbjct: 778 VLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRP----PRKDEVDGKHY--YFVTNEQM 831
Query: 201 MKKIEDNNTLVFIVH 245
M I++N L + H
Sbjct: 832 MADIQNNEYLEYGTH 846
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 29.1 bits (62), Expect = 1.6
Identities = 30/118 (25%), Positives = 47/118 (39%)
Frame = +3
Query: 78 FRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 257
F P E RHP R+ P+R + +K LT A+ + V +AN
Sbjct: 190 FAHPPDLE--RHPLSKRRGRPRRPQEQLETNVKLKLTRPASKAQRAPPTEPVAARTATAN 247
Query: 258 KHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII*TVPYFL 431
+ HIK ++L D + +G +R R D L ++I +I +FL
Sbjct: 248 QRHIKLFEEEL-DTTPGGESYATVVNGCLTELLRKERIIDLLTNPDEIELIKQAGWFL 304
>AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical
protein Y48G8AR.3 protein.
Length = 112
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 72 VHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 203
+ FRR + RH R+++P ++ I KFP SE A+
Sbjct: 1 MEFRRKCSRSAMRHKSQKRRAMPNQDVEKVNEIFKFPRISEQAL 44
>Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical
protein Y48E1B.8 protein.
Length = 383
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -3
Query: 337 PSGLMSVLTLATFIS*SFLTAALIWCLFALV*TIKTKVLLSSIFFIAASDVRGNLMML*A 158
P+GL S+L L F S + W L L+ K++ L ++ ++ A +L L
Sbjct: 4 PAGLQSLLALIFFNRLSLVIFYSFWFLIGLLVLRKSQNALEAVRYVKAHSASVSLDSLEG 63
Query: 157 SMRF--LLGRDF 128
S F LL DF
Sbjct: 64 STEFRQLLEEDF 75
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 126 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 290
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 126 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 290
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 126 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 290
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 126 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 290
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
protein T14E8.1c protein.
Length = 1018
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 410 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 294
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
protein T14E8.1b protein.
Length = 1030
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 410 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 294
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
protein T14E8.1a protein.
Length = 1086
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 410 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 294
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>AL117193-11|CAB55000.1| 174|Caenorhabditis elegans Hypothetical
protein Y105C5A.22 protein.
Length = 174
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 36 EHGKRVRKI-RNSVHFRRPK-TFEPPRHPKYPRKSLPKRNRMD 158
E K++RKI RN H R+ T + P Y R+S P+RN D
Sbjct: 122 ERRKKMRKIGRNFSHDRQQSSTSLSAQPPVYRRRSEPRRNDCD 164
>AF003151-9|AAK18911.1| 168|Caenorhabditis elegans Hypothetical
protein D1007.4 protein.
Length = 168
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 76 ISADPRRLNLLGTLNTQGSLCLREIAWMPTTSLNSLSRLK 195
++ DP +LL + S ++ I W+P+ S+ S+ +LK
Sbjct: 34 MTRDPVSQSLLIAKIEENSTSIKSIEWIPSCSVKSIRKLK 73
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.5
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +3
Query: 141 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 308
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 309 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 407
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.5
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +3
Query: 141 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 308
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 309 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 407
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.5
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +3
Query: 141 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 308
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 309 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 407
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
>Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 63 RNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 221
++++ PK F+PP Y +LP +RM + K + +++ EDN
Sbjct: 264 KSAISEMHPKLFQPPLLLSYKFNALPLSSRMSCKDFTK----KQFLLRQYEDN 312
>AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 63 RNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 221
++++ PK F+PP Y +LP +RM + K + +++ EDN
Sbjct: 264 KSAISEMHPKLFQPPLLLSYKFNALPLSSRMSCKDFTK----KQFLLRQYEDN 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,341,456
Number of Sequences: 27780
Number of extensions: 206537
Number of successful extensions: 725
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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