Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c21
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine re...    30   0.54 
AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical ...    30   0.54 
Z83232-4|CAB05756.2|  891|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81052-5|CAB02876.1|  512|Caenorhabditis elegans Hypothetical pr...    27   3.8  
L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical p...    27   6.7  
L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical ...    26   8.8  

>AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 71 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 0.54
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +2

Query: 77  RLFNSLRKLSTQKFV*PKLEAVYVMYFFVILIKQHNFL 190
           RL +S+R+LSTQKF+       +V+YFF  ++   +FL
Sbjct: 115 RLMSSVRRLSTQKFI----GNCFVVYFFSAVVLIFSFL 148


>AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical
           protein Y45G12C.9 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 0.54
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +2

Query: 77  RLFNSLRKLSTQKFV*PKLEAVYVMYFFVILIKQHNFL 190
           RL +S+R+LSTQKF+       +V+YFF  ++   +FL
Sbjct: 115 RLMSSVRRLSTQKFI----GNCFVVYFFSAVVLIFSFL 148


>Z83232-4|CAB05756.2|  891|Caenorhabditis elegans Hypothetical
           protein K04B12.3 protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 131 LEAVYVMYFFVILIKQHNFLTIHLFKFKNK*NS**LSTRKIINRR 265
           L  +++   F+I+ +Q + + + L +F  K NS  +  RK IN+R
Sbjct: 113 LHFLFISCHFIIIFEQTSRIDLELMRFLKKVNSARIQLRKKINQR 157


>Z81052-5|CAB02876.1|  512|Caenorhabditis elegans Hypothetical
           protein D2023.6 protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 195 IVRKLCCFISITKKYMT*TASNFGHTNFCVDSLRN 91
           I+RK+  F  +TK     T +  G+T + VDS+ +
Sbjct: 2   IIRKILAFKPLTKVLFVGTGAGAGYTAYTVDSVED 36


>L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical
           protein ZK353.1a protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  YLTHYVNYPHKNLCDQNWKR 140
           Y+   +NY   +LC  NW+R
Sbjct: 213 YIERLLNYAEMDLCPSNWRR 232


>L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical
           protein ZK353.1b protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  YLTHYVNYPHKNLCDQNWKR 140
           Y+   +NY   +LC  NW+R
Sbjct: 215 YIERLLNYAEMDLCPSNWRR 234


>AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical
           protein Y105C5A.15 protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 123 HTNFCVDSLRNELNR 79
           H  FC D L+NEL+R
Sbjct: 346 HLRFCADDLKNELSR 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,392,975
Number of Sequences: 27780
Number of extensions: 102934
Number of successful extensions: 179
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)