Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c20
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   181   7e-46
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   181   7e-46
AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA...    31   0.79 
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    30   1.8  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    30   1.8  
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   2.4  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   2.4  
AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA ...    28   7.4  
AE013599-2932|AAF57533.1|   93|Drosophila melanogaster CG18367-P...    28   9.7  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  181 bits (440), Expect = 7e-46
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKVV 365
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSKV+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVL 105



 Score =  112 bits (269), Expect = 3e-25
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = +3

Query: 357 KVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDR 536
           +V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDR
Sbjct: 56  QVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDR 115

Query: 537 KAILDR 554
           KAIL+R
Sbjct: 116 KAILER 121


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  181 bits (440), Expect = 7e-46
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKVV 365
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSKV+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVL 105



 Score =  112 bits (269), Expect = 3e-25
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = +3

Query: 357 KVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDR 536
           +V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDR
Sbjct: 56  QVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDR 115

Query: 537 KAILDR 554
           KAIL+R
Sbjct: 116 KAILER 121


>AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA
           protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 455 FSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNL*RVNADICCCTIGLFSL-NPLNVYNKL 279
           FS+    +  +LF +H H+ +  LAF+V  Y    +    C     ++ L +  NVYN +
Sbjct: 809 FSIARFEMLRRLFLVHGHYNSQRLAFLVLFYCYKNIIITGCMALYQVYDLYSATNVYNSI 868

Query: 278 F 276
           +
Sbjct: 869 Y 869


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
          Length = 2019

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +3

Query: 63   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 243  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKV 362
               GK+    R   V      Q ++ + A A  G  PS V
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPSSV 1811


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
            protein.
          Length = 2019

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +3

Query: 63   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 243  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKV 362
               GK+    R   V      Q ++ + A A  G  PS V
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPSSV 1811


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 204 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 293
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 204 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 293
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA
            protein.
          Length = 1340

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 480  HMLLHHWPFLFESSQCIQQTFYDTPASLCQPVGLCSVHVQPLKG 349
            H+L + WP +FE+S  + Q F D+   L   +G   +    L+G
Sbjct: 1246 HLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQG 1289


>AE013599-2932|AAF57533.1|   93|Drosophila melanogaster CG18367-PA
           protein.
          Length = 93

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 336 YVGIHPSKVVRGHYK-GQQVGKVMQVYRKKFVVY 434
           + G+H + V+R +YK    +    ++++K+F +Y
Sbjct: 4   WTGVHRAFVIRAYYKSNDSISTAQRLFKKQFSIY 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,810,664
Number of Sequences: 53049
Number of extensions: 589295
Number of successful extensions: 1421
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)