Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c19
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.29 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   1.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   1.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   1.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   1.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   1.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   3.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 238 HFFAVLDAVNGAHHVHFNFFRRSVYFVHFEQSIKIFNAHSLHI 110
           HF A+LD V+G H+   N  + +     F+  + + +  S+ I
Sbjct: 206 HFLALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICI 248



 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 283 IGLFGNFFIIHVRHLHFF 230
           +G+FG F ++ V    FF
Sbjct: 131 LGVFGEFVLVFVPDYVFF 148


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 38  RFYIINRDNN--GSIYATGKIRN----VPLDMQRMSVEDFDRLFE 154
           +FY++  DN     I+ T K  N    VP+   RMS+E    LF+
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFK 423


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 38  RFYIINRDNN--GSIYATGKIRN----VPLDMQRMSVEDFDRLFE 154
           +FY++  DN     I+ T K  N    VP+   RMS+E    LF+
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFK 423


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 38  RFYIINRDNN--GSIYATGKIRN----VPLDMQRMSVEDFDRLFE 154
           +FY++  DN     I+ T K  N    VP+   RMS+E    LF+
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFK 423


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 38  RFYIINRDNN--GSIYATGKIRN----VPLDMQRMSVEDFDRLFE 154
           +FY++  DN     I+ T K  N    VP+   RMS+E    LF+
Sbjct: 379 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFK 423


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 38  RFYIINRDNN--GSIYATGKIRN----VPLDMQRMSVEDFDRLFE 154
           +FY++  DN     I+ T K  N    VP+   RMS+E    LF+
Sbjct: 378 KFYLLETDNFFLREIWRTVKYHNKTSSVPIYFYRMSIETDLNLFK 422


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 151 RNGQNRRTFGRN*NVHDGHH 210
           +N  N  T  +N + H GHH
Sbjct: 310 QNNNNAATNNQNHHHHAGHH 329


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 47 CKTDESTC 24
          C TDE TC
Sbjct: 34 CNTDEETC 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,910
Number of Sequences: 336
Number of extensions: 1558
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)