Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c19
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA...    27   4.9  
AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p pro...    27   8.6  
AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like ...    27   8.6  
AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA...    27   8.6  

>AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA
            protein.
          Length = 2075

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 40   VLHNQPRQQRINLRHRKNQKRSS*YAENE 126
            + H+ PRQ +  L  ++NQ+RS   AEN+
Sbjct: 1119 IKHSGPRQTQEELTRQQNQERSHSNAENQ 1147


>AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p
           protein.
          Length = 781

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 TIDGVKYGKEMQMTDMNNKKITEK 277
           T  G+KY +E  + DMN   +T+K
Sbjct: 538 TDQGLKYDREWMIVDMNGMALTQK 561


>AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like
           protein protein.
          Length = 737

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 TIDGVKYGKEMQMTDMNNKKITEK 277
           T  G+KY +E  + DMN   +T+K
Sbjct: 538 TDQGLKYDREWMIVDMNGMALTQK 561


>AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA
           protein.
          Length = 781

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 TIDGVKYGKEMQMTDMNNKKITEK 277
           T  G+KY +E  + DMN   +T+K
Sbjct: 538 TDQGLKYDREWMIVDMNGMALTQK 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,869,504
Number of Sequences: 53049
Number of extensions: 262838
Number of successful extensions: 632
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)