Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20c17
(220 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067864-1|AAH67864.2| 412|Homo sapiens ADAM5P protein protein. 31 0.67
CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein. 28 6.2
BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein. 28 6.2
AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein. 28 6.2
AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein ... 27 8.2
AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein. 27 8.2
AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein. 27 8.2
AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein. 27 8.2
AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein. 27 8.2
AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein. 27 8.2
AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens ... 27 8.2
AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein. 27 8.2
>BC067864-1|AAH67864.2| 412|Homo sapiens ADAM5P protein protein.
Length = 412
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 62 MHLLIKSQDVYKPPNCQKMKTVDKLCPFAGNCKGLNPIC 178
MH+++ ++++KP N K+V K C F C G P C
Sbjct: 154 MHIVV-DKNLFKPANMICRKSVGKECDFTEYCNGDLPYC 191
>CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein.
Length = 683
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -2
Query: 141 GQSLSTVFIFWQFGGLYTS---WDLI 73
G+ LS + IFW GGLY S W +I
Sbjct: 233 GEHLSWLGIFWMTGGLYASAMAWSII 258
>BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein.
Length = 683
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -2
Query: 141 GQSLSTVFIFWQFGGLYTS---WDLI 73
G+ LS + IFW GGLY S W +I
Sbjct: 233 GEHLSWLGIFWMTGGLYASAMAWSII 258
>AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein.
Length = 707
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -2
Query: 141 GQSLSTVFIFWQFGGLYTS---WDLI 73
G+ LS + IFW GGLY S W +I
Sbjct: 257 GEHLSWLGIFWMTGGLYASAMAWSII 282
>AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein
protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 597 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 628
>AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens
cDNA FLJ45344 fis, clone BRHIP3010289, moderately
similar to Attractin precursor. ).
Length = 1233
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 451 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 482
>AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein.
Length = 1028
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 53 GEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAG 151
G +L+ VYKPPNC+ + ++LC AG
Sbjct: 246 GGFSSVLLNDILVYKPPNCKAFRD-EELCKNAG 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,982,512
Number of Sequences: 237096
Number of extensions: 658368
Number of successful extensions: 1058
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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