Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20c17
(220 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical ... 26 3.2
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 26 3.2
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 26 3.2
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z83236-9|CAN86907.1| 140|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical p... 25 9.6
AC006673-12|AAF39921.1| 494|Caenorhabditis elegans Cytochrome p... 25 9.6
AC006618-1|AAK68250.1| 762|Caenorhabditis elegans Hypothetical ... 25 9.6
>AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical
protein Y47H9C.2 protein.
Length = 368
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
Frame = +2
Query: 89 VYKPPNCQKMKTVDKL-------CPFAGNCKGL 166
+Y+PP C D CP+ GNC GL
Sbjct: 171 LYRPPRCSHCAICDNCVLMFDHHCPWVGNCIGL 203
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 14 ALTHFYNYDSKCVGEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAGNCKGL 166
A+T +N DS E + +L ++ P QK++T+ K+C G K L
Sbjct: 827 AMTAKHNEDSLSFNEFLTVL---REFVNAPQKQKLQTLFKMCDLEGKNKVL 874
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 14 ALTHFYNYDSKCVGEVMHLLIKSQDVYKPPNCQKMKTVDKLCPFAGNCKGL 166
A+T +N DS E + +L ++ P QK++T+ K+C G K L
Sbjct: 835 AMTAKHNEDSLSFNEFLTVL---REFVNAPQKQKLQTLFKMCDLEGKNKVL 882
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 20 THFYNYDSKCVGEVMHLLIK-SQDVYKPPNCQKMKTVDKLCPFAG 151
TH YN+ + VG+++ + ++ S + P +M + K AG
Sbjct: 67 THIYNFQNNRVGDILPIFVEVSSQIQHTPLLPEMVELIKSLRLAG 111
>Z83236-9|CAN86907.1| 140|Caenorhabditis elegans Hypothetical
protein K10H10.12 protein.
Length = 140
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 115 NENCRQALSVCWQLQGPQSYL*LLNNKTIIN 207
NE+C QA S+C Q+ G S NNK + N
Sbjct: 85 NESCHQAQSICEQV-GGVSGCHTCNNKHMCN 114
>Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical
protein ZK662.5 protein.
Length = 598
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 101 PNCQKMKTVDKLCPFAGNCKGLNPICNY 184
PNC KT D C L P+ NY
Sbjct: 100 PNCMVPKTYDLAKAMDKICSALKPLVNY 127
>Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +2
Query: 11 KALTHFYNYDSKCVGEVMHLLIKSQDVYKPPNCQKMKTVDKLCPF 145
K H+YN C + M + + + K+ T + LCP+
Sbjct: 166 KRACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPY 210
>Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +2
Query: 11 KALTHFYNYDSKCVGEVMHLLIKSQDVYKPPNCQKMKTVDKLCPF 145
K H+YN C + M + + + K+ T + LCP+
Sbjct: 166 KRACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPY 210
>AC006673-12|AAF39921.1| 494|Caenorhabditis elegans Cytochrome p450
family protein 35A3 protein.
Length = 494
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = -2
Query: 162 PLQLPANGQSLSTVFIFWQFGGLYTSWDLIKR 67
P+ P G + W GG+ ++ DL+++
Sbjct: 29 PISFPLIGNLPQICYYLWSTGGIVSALDLLRK 60
>AC006618-1|AAK68250.1| 762|Caenorhabditis elegans Hypothetical
protein C45B2.6 protein.
Length = 762
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 171 GLRPLQLPANGQSLSTVFIFWQFG 100
GL P+ A +LST+ + W G
Sbjct: 334 GLTPMHYIAKNGNLSTIILLWSHG 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,693,249
Number of Sequences: 27780
Number of extensions: 105852
Number of successful extensions: 271
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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