Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c09
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   1.1  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   1.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.6  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 478 LRTEEHTIMGVDDVPA-FNVRPDPDPLFPERFKGE 579
           L  E + I+ + DV    ++ PDP+ L P+RF  E
Sbjct: 81  LPKESNAIIHIYDVHRNADIYPDPEKLDPDRFLPE 115


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 529 NVRPDPDPLFPERFKGE 579
           ++ PDP+   PERF+ E
Sbjct: 116 DIYPDPEKFDPERFRPE 132


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 529 NVRPDPDPLFPERFKGE 579
           NV PDP+   P+RF  E
Sbjct: 399 NVFPDPEKFDPDRFLPE 415


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 529 NVRPDPDPLFPERFKGE 579
           NV PDP+   P+RF  E
Sbjct: 399 NVFPDPEKFDPDRFLPE 415


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 538 PDPDPLFPERFKGE 579
           PDP+   PERF  E
Sbjct: 391 PDPEKFDPERFSDE 404


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 169 HNNRRHLTRDATCSRSVYAE 110
           H+  +HL++  TC + +Y E
Sbjct: 80  HDFTQHLSQYDTCQQGIYPE 99


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 538 PDPDPLFPERFKGE 579
           PDP+   PERF  E
Sbjct: 404 PDPEKYDPERFSDE 417


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 169 HNNRRHLTRDATCSRSVYAE 110
           H+  +HL++  TC + +Y E
Sbjct: 80  HDFTQHLSQYDTCQQGIYPE 99


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 169 HNNRRHLTRDATCSRSVYAE 110
           H+  +HL++  TC + +Y E
Sbjct: 80  HDFTQHLSQYDTCQQGIYPE 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,682
Number of Sequences: 336
Number of extensions: 3352
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)