Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20c03
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   0.93 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    26   1.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    26   1.2  
AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 prote...    24   5.0  
AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 prote...    24   5.0  
AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.    24   5.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 102 NLNGDRNTAVPMITKDVEKVSTPAPGVGKVLIRED 206
           NLNG+  T VP+  KD+  + T   G   + + E+
Sbjct: 470 NLNGNELTQVPLALKDMRLLRTVDLGENSISVIEE 504


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 110 VEIFHVQIQTSLGIILRFAIRGALWCVYTRSRSE 9
           VE F + I     +I+ F + GAL C++ RSRS+
Sbjct: 662 VEDFALDIACLFALIVLFRL-GALLCLWLRSRSK 694


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 110 VEIFHVQIQTSLGIILRFAIRGALWCVYTRSRSE 9
           VE F + I     +I+ F + GAL C++ RSRS+
Sbjct: 662 VEDFALDIACLFALIVLFRL-GALLCLWLRSRSK 694


>AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 413 DSIVDCICEAREYRP 369
           DS+ D +CE R+Y P
Sbjct: 36  DSLKDRVCELRQYTP 50


>AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 413 DSIVDCICEAREYRP 369
           DS+ D +CE R+Y P
Sbjct: 36  DSLKDRVCELRQYTP 50


>AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 413 DSIVDCICEAREYRP 369
           DS+ D +CE R+Y P
Sbjct: 36  DSLKDRVCELRQYTP 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,522
Number of Sequences: 2352
Number of extensions: 15591
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)