Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20b05
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134...    28   6.2  
03_02_0982 + 12925861-12926211,12926309-12926378,12927190-129272...    28   6.2  

>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
            1342225-1342799,1343596-1343703,1345823-1346155,
            1346783-1349306
          Length = 1630

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 303  NVDEPRGTAAALGEGDVFLHSQHDHGTGGHW 395
            + D  RG     G      + +HDHG GG W
Sbjct: 987  SADTGRGRGRGRGRPGGRFNGRHDHGQGGRW 1017


>03_02_0982 +
           12925861-12926211,12926309-12926378,12927190-12927287,
           12927467-12927615,12928083-12928198,12928521-12928617,
           12929122-12929206,12929303-12929365,12929505-12929645
          Length = 389

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 360 HSQHDHGTGGHWCAKIIFFSLLAVLVTLIGLIILENRGLTELEANSVESRYSGVL 524
           H+ H HG+ GH     +   +LA+ VT   + + E  GL  +   + E   SG++
Sbjct: 188 HAHHSHGSSGHHHGIDLEHPILALSVTAFAISVKE--GLYWITKRAGEKEGSGLM 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,387
Number of Sequences: 37544
Number of extensions: 273365
Number of successful extensions: 639
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)