Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20b05
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060905-1|AAL28453.1|  556|Drosophila melanogaster GM05229p pro...   113   3e-25
AF289494-1|AAG40807.1|  382|Drosophila melanogaster aspartyl bet...   113   3e-25
AF289493-1|AAG40806.1|  785|Drosophila melanogaster aspartyl bet...   113   3e-25
AE013599-2185|AAM70948.2|  556|Drosophila melanogaster CG8421-PE...   113   3e-25
AE013599-2184|AAF58064.2|  556|Drosophila melanogaster CG8421-PD...   113   3e-25
AE013599-2183|AAF58063.2|  382|Drosophila melanogaster CG8421-PB...   113   3e-25
AE013599-2182|AAM70947.1|  785|Drosophila melanogaster CG8421-PA...   113   3e-25

>AY060905-1|AAL28453.1|  556|Drosophila melanogaster GM05229p
           protein.
          Length = 556

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AF289494-1|AAG40807.1|  382|Drosophila melanogaster aspartyl
           beta-hydroxylase variant2 protein.
          Length = 382

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AF289493-1|AAG40806.1|  785|Drosophila melanogaster aspartyl
           beta-hydroxylase variant1 protein.
          Length = 785

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AE013599-2185|AAM70948.2|  556|Drosophila melanogaster CG8421-PE,
           isoform E protein.
          Length = 556

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AE013599-2184|AAF58064.2|  556|Drosophila melanogaster CG8421-PD,
           isoform D protein.
          Length = 556

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AE013599-2183|AAF58063.2|  382|Drosophila melanogaster CG8421-PB,
           isoform B protein.
          Length = 382

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


>AE013599-2182|AAM70947.1|  785|Drosophila melanogaster CG8421-PA,
           isoform A protein.
          Length = 785

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 243 MSGDVQPXXXXXXXXXXXEINVDEPRGT-AAALGEGDVFLHSQHDHGTGGHWCAKIIFFS 419
           MSGDVQP           +   +   G     +G  D+ LH  HDHGTGGHWCAKIIFF+
Sbjct: 1   MSGDVQPRKRKDKRRKRDDD--ESSHGVHITKMGNEDLHLHVHHDHGTGGHWCAKIIFFA 58

Query: 420 LLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDH--HDEQ 569
           L+AVL+ L+GLII+ENRGL +L+    ESR+S V DGW+++  D+H  HD Q
Sbjct: 59  LMAVLLGLVGLIIMENRGLEDLDTPLSESRFSKVFDGWVDEHRDEHDGHDVQ 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,381,748
Number of Sequences: 53049
Number of extensions: 462613
Number of successful extensions: 983
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)