Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20b04
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein.         46   9e-05
AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein.        46   9e-05
BC064834-1|AAH64834.1|   75|Homo sapiens LRBA protein protein.         43   8e-04
AF467287-1|AAM53530.1| 2851|Homo sapiens beige-like protein prot...    42   0.001
AF216648-1|AAG48558.2| 2863|Homo sapiens LPS responsive and Beig...    42   0.001

>AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein.
          Length = 2943

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein.
          Length = 2946

 Score = 46.0 bits (104), Expect = 9e-05
 Identities = 20/31 (64%), Positives = 28/31 (90%)
 Frame = +1

Query: 187 NDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           N  +KFAVLIGLI+VG+V+NR++V TVL+L+
Sbjct: 69  NIRMKFAVLIGLIQVGEVSNRDIVETVLNLL 99


>BC064834-1|AAH64834.1|   75|Homo sapiens LRBA protein protein.
          Length = 75

 Score = 42.7 bits (96), Expect = 8e-04
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +1

Query: 196 LKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           +KFAVL GL+EVG+V+NR++V TV +L+
Sbjct: 46  MKFAVLTGLVEVGEVSNRDIVETVFNLV 73


>AF467287-1|AAM53530.1| 2851|Homo sapiens beige-like protein
           protein.
          Length = 2851

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +1

Query: 196 LKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           +KFAVL GL+EVG+V+NR++V TV +L+
Sbjct: 46  MKFAVLTGLVEVGEVSNRDIVETVFNLL 73


>AF216648-1|AAG48558.2| 2863|Homo sapiens LPS responsive and
           Beige-like anchor protein LRBA protein.
          Length = 2863

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +1

Query: 196 LKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           +KFAVL GL+EVG+V+NR++V TV +L+
Sbjct: 46  MKFAVLTGLVEVGEVSNRDIVETVFNLL 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,177,643
Number of Sequences: 237096
Number of extensions: 1212491
Number of successful extensions: 1603
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)