Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20b04
         (537 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030285-1|ABN49424.1|   58|Drosophila melanogaster IP18551p pro...    97   2e-20
AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,...    96   2e-20

>BT030285-1|ABN49424.1|   58|Drosophila melanogaster IP18551p
           protein.
          Length = 58

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 44/54 (81%), Positives = 51/54 (94%)
 Frame = +1

Query: 118 MADLKSPPFSDIKRPEEVVRMTTNDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           MAD+  PP+S+IKRP+E+VRMTT D+LKFAVLIGLIEVGQVTNREVVNTVLHL+
Sbjct: 1   MADIMRPPYSEIKRPDEIVRMTTADNLKFAVLIGLIEVGQVTNREVVNTVLHLV 54


>AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,
           isoform C protein.
          Length = 3719

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 44/54 (81%), Positives = 51/54 (94%)
 Frame = +1

Query: 118 MADLKSPPFSDIKRPEEVVRMTTNDSLKFAVLIGLIEVGQVTNREVVNTVLHLI 279
           MAD+  PP+S+IKRP+E+VRMTT D+LKFAVLIGLIEVGQVTNREVVNTVLHL+
Sbjct: 1   MADIMRPPYSEIKRPDEIVRMTTADNLKFAVLIGLIEVGQVTNREVVNTVLHLL 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,199,663
Number of Sequences: 53049
Number of extensions: 406121
Number of successful extensions: 709
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)