Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a21
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 40 0.002
07_03_1751 - 29215074-29216270 34 0.083
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 33 0.14
02_02_0582 - 11798252-11798908 32 0.44
07_03_1432 - 26508135-26508881,26509301-26509708 31 0.58
03_02_0765 + 11000724-11002496 31 0.58
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 31 0.58
10_08_0241 - 16111792-16112367 31 0.77
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 30 1.3
02_05_0059 - 25482207-25482271,25482432-25482651 30 1.3
01_01_0570 - 4231100-4232560 30 1.8
05_05_0310 - 23991461-23991652,23991780-23991965,23992813-239930... 29 2.4
10_08_0240 - 16106963-16107538 29 3.1
09_06_0083 + 20753191-20754480 29 3.1
08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741 29 3.1
07_03_1433 + 26513728-26514135,26525534-26526280 29 3.1
07_03_0560 + 19479597-19480667 29 3.1
07_03_0559 + 19475893-19476783 29 3.1
01_06_0438 - 29376338-29377519 29 3.1
11_07_0007 - 27262229-27262638,27263252-27263312 29 4.1
09_02_0274 + 6611555-6611615,6612229-6612638 29 4.1
07_03_1636 + 28290642-28291574 29 4.1
06_03_1326 - 29355467-29355817 29 4.1
02_02_0444 + 10340927-10341063,10341157-10341241,10341480-103415... 29 4.1
01_06_0517 + 29981537-29981927,29982024-29982231,29982373-299825... 29 4.1
07_03_0558 + 19461369-19462448 28 5.4
06_03_1153 - 28047125-28047751 28 5.4
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 28 5.4
11_06_0610 - 25449085-25453284 28 7.2
10_06_0036 - 9914606-9915561,9916287-9916368 28 7.2
05_05_0240 + 23548408-23549408,23549882-23549980,23550282-235503... 28 7.2
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 28 7.2
02_01_0016 + 110796-110979,111252-111768,111847-112213 28 7.2
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 7.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 9.5
08_01_0893 - 8789491-8791416 27 9.5
07_03_0177 - 14770777-14772045 27 9.5
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 27 9.5
05_06_0078 - 25412770-25413852 27 9.5
03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684 27 9.5
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422... 27 9.5
01_02_0031 + 10364487-10365407 27 9.5
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 634 FFPMRLDPPRP*TFPL-CNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISE 458
F P PP P FP L PL F LP P PP PPS P+ F P++
Sbjct: 284 FSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAP 343
Query: 457 L-PPIP 443
L PP P
Sbjct: 344 LFPPYP 349
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = -1
Query: 613 PPRP*TFPLCNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIPFRL 434
PP P +P P WF +P + PP PP L P IPF P P PF L
Sbjct: 210 PPWP--WPPIPFCTPRPWFPPIPF-LTPPPPP--FLPFPLPPIPFLTPPSPPPPAFPFPL 264
>07_03_1751 - 29215074-29216270
Length = 398
Score = 34.3 bits (75), Expect = 0.083
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRG-SSMLQSGNVHGLGGSS 620
G GG + G G GG F GGLGG +G + H G G GLGG
Sbjct: 68 GFGGGAGGGLGHGGGIGGGFGGGKGGGLGGGVGVGGGIGHGGGVGGGFGGGKGGGLGGGG 127
Query: 621 LIG 629
+G
Sbjct: 128 GLG 130
>01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 270 LYCSLIPD-FW*MVCTFSTMILHKNLTWLILFAVDEYK-QKEDIADILRFLVRYENRNLN 443
++ L+PD FW + F + + L L LF V++ K Q + +R E R+L
Sbjct: 986 VFLLLLPDVFWEIDVLFLRVNTYLTLVLLDLFQVNQKKCQLHKLDKAIRDTKNMEERSLE 1045
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGL 527
+ L+ + GG SS H GGL
Sbjct: 1046 QHAMNKLVEMAYKKLMGGRGSSSHKGGL 1073
>02_02_0582 - 11798252-11798908
Length = 218
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGS 617
G GG S+ G GG + GG GG +GR N + G SG+V G GS
Sbjct: 139 GHGGVSISTGGGGGAGGGESAGSSGGGFGGGNGVGRAGNAVGGGG--GSGSVIGSSGS 194
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 31.5 bits (68), Expect = 0.58
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = -1
Query: 613 PPRP*TFPLCNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIP 443
PP P T+P L P P PPS L PS P +LP S PP P
Sbjct: 28 PPTPITYPSPPSLSPST-----PPTYPPPSSTPPSLAPVSPSPPTTYLPPSPTPPSP 79
>03_02_0765 + 11000724-11002496
Length = 590
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 450 GGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNL-NHLRGSSMLQSGNVHGLGGSSLI 626
GG L G G+ GGA + GGLGG T G L G L G GLGG +
Sbjct: 260 GGGGLSGGAGGGLGGGAGAGGG-GGLGGGTGGGGGLGGGTGGGGGLGGGAGGGLGGGAGA 318
Query: 627 GKNL 638
G L
Sbjct: 319 GGGL 322
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +3
Query: 450 GGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIG 629
GG L G G+ GGA + LGG G+ G G L G GLGG + G
Sbjct: 300 GGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAG 359
Query: 630 KNL 638
L
Sbjct: 360 GGL 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +3
Query: 450 GGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIG 629
GG L G G+ GGA + LGG G+ G G L G GLGG + G
Sbjct: 340 GGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAG 399
Query: 630 KNL 638
L
Sbjct: 400 GGL 402
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +3
Query: 450 GGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIG 629
GG L G G+ GGA + LGG G+ G G L G GLGG + G
Sbjct: 380 GGGGLGGGAGGGLGGGAGAGGGLGGGAGTGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAG 439
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 550 LPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIP 443
LP PP PP L++ PPS LP S++PP+P
Sbjct: 274 LPAPNAPPPPPT--LQSQPPSQYPGHLPHSQVPPVP 307
>10_08_0241 - 16111792-16112367
Length = 191
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSS-KHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSS 620
G G S+ G +A+G GG GG G + G L GSS +G GGSS
Sbjct: 57 GSGSSNYYGAHASGGGGGGGGGYSQYGGSGSGSGYGTGL----GSSQTSQNGYYGYGGSS 112
Query: 621 LIG 629
G
Sbjct: 113 SAG 115
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 420 RYENRNLN-GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGN 596
R+ R+ G GG G G GG + GG GG + GR + RG SG
Sbjct: 533 RFAGRDFRQGSGGGYSGGGGGGGYSGGGGGGGYSGGGGGYSGGGRGGGYSRGGRGGYSGG 592
Query: 597 VHGLGG 614
G GG
Sbjct: 593 GGGGGG 598
>02_05_0059 - 25482207-25482271,25482432-25482651
Length = 94
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 363 AVDEYKQKEDIADILRFLVRYENRNLNGIGGSSLIGRNANG--IEGGAFSSKHLGGLGGS 536
AVD+ +++ + D+ R R + +N GG S+ G +G GG GG GG
Sbjct: 4 AVDQRREEVRLLDVSRRR-RGGGQQVNDGGGGSMKGGGDSGSLARGGDGGGSTWGG-GGG 61
Query: 537 TLIGRNLNHLRGSSMLQSGNV 599
+GR N+ G S + G +
Sbjct: 62 GSVGRGGNNGGGGSCAKCGQI 82
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGG 614
G+GG G G GG GGLGG G L GS L G + G GG
Sbjct: 60 GVGGGEGGGVGVGGGVGGGTGGGAAGGLGGG---GGGGGGLGGSGGLGGGGMGGSGG 113
>05_05_0310 -
23991461-23991652,23991780-23991965,23992813-23993094,
23993220-23993382,23993477-23993661,23994154-23994205,
23994292-23994392,23995244-23995417
Length = 444
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 541 RVDPP-SPPKCLLENAPPSIPFAFLPISEL 455
R PP PP ++ PP +P+ F P S L
Sbjct: 32 RAPPPLMPPDAVMRELPPPVPYVFTPQSAL 61
>10_08_0240 - 16106963-16107538
Length = 191
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G G S+ G +A+G GG G GS G GSS +G GGSS
Sbjct: 57 GSGSSNYYGAHASGGGGGGGGGYSQYGGSGS---GSGYGSGSGSSQTSQNGYYGYGGSSS 113
Query: 624 IG 629
G
Sbjct: 114 AG 115
>09_06_0083 + 20753191-20754480
Length = 429
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 547 PIRVDPPSPPKCLLENAPPSIPFAFLPISELPPI 446
P P SP + L + PP+ P AF+P + LPP+
Sbjct: 266 PADTYPVSPDQPLYSSPPPA-PTAFVPHTPLPPV 298
>08_02_0117 + 12767502-12767588,12768846-12768908,12769299-12770741
Length = 530
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -1
Query: 550 LPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIPFRLRFS*RTRNRKMSAISSF 383
LPI PP PP L+ PPS+ +AFL P+ + S R ++ + +
Sbjct: 450 LPIMEPPPRPP-LELKPLPPSLRYAFLHNGREAPVIISDKLSEDETQRLLAVLEKY 504
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = -1
Query: 613 PPRP*TFPLCNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIP 443
PP P T+P L P + P PPSP PS P + P S PP P
Sbjct: 28 PPTPITYPSPPSLSPSMPPTYPPPSSTPPSPAP-----VSPSPPTTYPPPSTTPPNP 79
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGG 533
G+GG S G G GG F GGLGG
Sbjct: 155 GVGGGSGTGGGLGGGGGGGFGGDGGGGLGG 184
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 426 ENRNLNGIGGSSLIGRNANGIEGGAFSSKHL---GGLGGSTLIGRNLNHLRGSSMLQSGN 596
E L G GG L G G+ GG GG+GG + G L G G
Sbjct: 120 EGGGLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGG 179
Query: 597 VHGLGG 614
GLGG
Sbjct: 180 -GGLGG 184
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G+GG + G G GG GG+GG G G+ SG + G GG L
Sbjct: 231 GMGGGAGGGGGLGGGGGGGMGGGGGGGMGGGAGGGFGGGAGGGAGQGGSGGLGGGGGGGL 290
Query: 624 IG 629
G
Sbjct: 291 GG 292
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/67 (35%), Positives = 26/67 (38%)
Frame = +3
Query: 438 LNGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGS 617
L G GG + G G+ GGA GG GG G GS L G GLGG
Sbjct: 242 LGGGGGGGMGGGGGGGMGGGAG-----GGFGGGAGGGAGQG---GSGGLGGGGGGGLGGG 293
Query: 618 SLIGKNL 638
G L
Sbjct: 294 GGAGGGL 300
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGG 614
G+GG S G G GG F GG+GG G G SG GLGG
Sbjct: 108 GVGGGSGAGGGLGGGGGGGFGGGSGGGVGGGGGQGGGFG-AGGGVGGGSGTGGGLGG 163
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGG 614
G GG G G EGG F GG+GG + G L G G+ G+GG
Sbjct: 86 GFGGGGGGGLGGGGCEGGGFG----GGVGGGSGAGGGLGG-GGGGGFGGGSGGGVGG 137
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGG 533
G+GG S G G GG F GG+GG
Sbjct: 150 GVGGGSGTGGGLGGGGGGGFGGGGGGGIGG 179
>01_06_0438 - 29376338-29377519
Length = 393
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 441 NGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRG 572
N +GG++ G + + GA S + G GG+ G + N+ G
Sbjct: 108 NQLGGAACDGSDGGAVSNGAMLSSYSGTTGGNISSGESNNYSGG 151
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G GG+ G +A G GG H GG GG G L+ RG +G G G SL
Sbjct: 84 GCGGAGHGGGSAGGGRGGGAGGSHRGGGGGR---GGGLSG-RGHGSGGAGGSSGGGRRSL 139
Query: 624 IG 629
G
Sbjct: 140 PG 141
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G GG+ G +A G GG H GG GG G L+ RG +G G G SL
Sbjct: 84 GCGGAGHGGGSAGGGRGGGAGGSHRGGGGGR---GGGLSG-RGHGSGGAGGSSGGGRRSL 139
Query: 624 IG 629
G
Sbjct: 140 PG 141
>07_03_1636 + 28290642-28291574
Length = 310
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 532 PPSPPKCLLENAPPSIPF 479
PP PP L E APPS P+
Sbjct: 151 PPPPPPQLFETAPPSPPY 168
>06_03_1326 - 29355467-29355817
Length = 116
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSG 593
G GG G +G GG +S H GG GG+ G G SM G
Sbjct: 40 GGGGGKGGGEGGSGKYGGGYSGGHAGGGGGAGKSGGYHGGGGGDSMKAPG 89
>02_02_0444 +
10340927-10341063,10341157-10341241,10341480-10341537,
10343738-10345885,10345943-10346388
Length = 957
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 423 YENRNLNGI-GGSSLIGRNANGIEGGAFSSKHLGGLG-GSTLIGRNLNHLRGSSMLQSGN 596
Y+ + G+ GG ++G NG G + +GGL G ++ L+ G +L G
Sbjct: 351 YDGATIEGLDGGGDVVGGGLNGGGGWLYDGATVGGLDEGGGVVDGGLD--GGGEVLDGGL 408
Query: 597 VHGLGGSSL 623
G GG L
Sbjct: 409 DEGGGGGWL 417
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 423 YENRNLNG-IGGSSLIGRNANGIEGGAFSSKHLGGL-GGSTLIGRNLN---HLRGSSMLQ 587
Y+ + G +GG L+G +G G + +GGL G ++G L+ + G + +
Sbjct: 750 YDGATVGGLVGGGDLVGGGLDGGGGWLYDGATVGGLVEGGGVVGGGLDGGGKVLGGGLDE 809
Query: 588 SGNVHGLGGSSLIGKNL 638
G+V G GG + G+ L
Sbjct: 810 GGDVVG-GGLNGGGEEL 825
>01_06_0517 +
29981537-29981927,29982024-29982231,29982373-29982544,
29984468-29984533,29984658-29984771,29984880-29984996,
29985097-29985223,29985317-29985603,29985701-29985891,
29985981-29986063,29986175-29986251,29986729-29986896
Length = 666
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLR 569
G + GRN G + SS+HL G+GG++ NL+ R
Sbjct: 2 GTEAGDVDGRNHRPGRGSSASSRHLHGVGGASAAEVNLSGRR 43
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/62 (33%), Positives = 23/62 (37%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G GG G G GG H GG GG +G G + G G GGS L
Sbjct: 164 GAGGGVGGGGGFGGGGGGGLGGGHGGGFGGGAGVGGGA----GGGVGGGGGFGGGGGSGL 219
Query: 624 IG 629
G
Sbjct: 220 GG 221
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 441 NGIGGSSLIGRNANGIEGGAFSSKH-LGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGS 617
+G+GG G A G GG GG GG L G + G + + SG G+GG
Sbjct: 217 SGLGGGQGGGFGAGGGAGGGIGGGGGFGGGGGGGLGGGHGGGFGGGAGVGSGAGGGVGGG 276
Query: 618 SLIG 629
G
Sbjct: 277 GGFG 280
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNL-NHLRGSSMLQSGNVHGLGG 614
G GG G G GG H GG GG +G + G G GLGG
Sbjct: 232 GAGGGIGGGGGFGGGGGGGLGGGHGGGFGGGAGVGSGAGGGVGGGGGFGGGGGGGLGG 289
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G GG + +G A G GG GG GG L G + + G + + G G+GG
Sbjct: 258 GFGGGAGVGSGAGGGVGGGGG---FGGGGGGGLGGGHGSGFGGGAGVGGGAGGGVGGGGG 314
Query: 624 IG 629
G
Sbjct: 315 FG 316
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +3
Query: 426 ENRNLNGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLN-HLRGSSMLQSGNVH 602
E G GG G G GG H GG GG +G + + G G
Sbjct: 48 EGEGFGGGGGFGGGGGGGLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFGGGGGG 107
Query: 603 GLGG 614
GLGG
Sbjct: 108 GLGG 111
>06_03_1153 - 28047125-28047751
Length = 208
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 477 ANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSG 593
ANG GG S+ GGL GS+ IG N + G+ L G
Sbjct: 154 ANG--GGGHSANGGGGLDGSSSIGTNGGDIGGNDDLYGG 190
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 583 NMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISELPPIPFRLRFS*RTRNRK 404
++ P + + L R PPS P APP P LP + +PP + F R R R
Sbjct: 4 HLAPPGSFHRLLASRHYPPSSP------APPPRPLLLLPKTLIPPAAAAMEFPRRGR-RD 56
Query: 403 MSAISS 386
++A S+
Sbjct: 57 VAAASA 62
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -1
Query: 628 PMRLDPPRP*TFPLCNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPISE--L 455
P+ +PP + P + P + P + PPS P+ E++PPS+P A P +E L
Sbjct: 1068 PVTSEPPPAKSSPPHEPISPPE----TPEKSYPPSTPE---ESSPPSVPKASSPPTEKSL 1120
Query: 454 PP 449
PP
Sbjct: 1121 PP 1122
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 532 PPSPPKCLLENAPPSIPFAFLPISELPPIP 443
PP PP + PP +P +F P + +P
Sbjct: 162 PPLPPTSVASPPPPGVPLSFAPNAPPEVVP 191
>05_05_0240 +
23548408-23549408,23549882-23549980,23550282-23550354,
23550416-23550478
Length = 411
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = -1
Query: 457 LPPIPFRLRFS*RTRNRKMSAISSFCLYSSTANSISHVRFLCKIIVENVQTIHQKSG 287
L P F+ +F R N+ + +FCL+ ++ +SIS + F+ V+N ++ + G
Sbjct: 316 LGPEDFKHKFKGRKINKNNTHWFNFCLFCTSTSSISALPFMFS-AVKNSWSLEWREG 371
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 544 IRVDPPSPPKCLLENAPPSIPFAFLPISELPPI 446
I PPS +L PPS P A +P+S PP+
Sbjct: 25 IHAAPPSAA-AVLPARPPSPPRASIPVSSSPPL 56
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -1
Query: 571 PLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLP--ISELPPIP 443
PL+ F P + PSPP L +P P P S PP+P
Sbjct: 145 PLRPMDFCPSPLTSPSPPALALAPSPIPTPIIAPPPVSSPAPPLP 189
>01_01_0623 +
4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +3
Query: 489 EGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIGKNL 638
+GG S K GG GGS I H G GN GG + N+
Sbjct: 255 DGGDSSEKGGGGSGGSIYIKSKTMHGAGKISASGGNGLAGGGGGRVSINV 304
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -1
Query: 613 PPRP*TFPLCNMLDPLKWFKFLPIRVDPPSP-PKCLLEN-APPSIPFAFLPISELPPIP 443
PP P P L + P PP P P CL+ + PP P LP +PP P
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPP 621
>08_01_0893 - 8789491-8791416
Length = 641
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 505 ENAPPSIPFAFLPISELPPIPFRLRFS*RTRNRKMSAISSFCLYSSTANSISHVRFLCKI 326
E P + ++FLP + P+P R+R R +S + + +S+V F+ K+
Sbjct: 485 EEPIPIMKYSFLP--KHSPLPLRMRLVKRHSGTLLSVMIQYASNPMLPQPLSNVTFIVKL 542
Query: 325 IVE 317
V+
Sbjct: 543 PVD 545
>07_03_0177 - 14770777-14772045
Length = 422
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/64 (29%), Positives = 24/64 (37%)
Frame = +3
Query: 444 GIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSL 623
G+GG +G G GG F G+GG G G G G GG +
Sbjct: 360 GLGGGGGLGGGGGG-GGGGFGGGGGSGIGGGFGKGGGFGFGVGGGGFGGGGGGGGGGGGI 418
Query: 624 IGKN 635
GK+
Sbjct: 419 GGKH 422
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 465 IGRNANGIEGGAFSS----KHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLIGK 632
+G+ A G GG ++S + +GGLGG ++ +L S SG+V GSS+
Sbjct: 49 VGQGAAGQYGGPYASVYGTQQVGGLGGKGPASSSIPNLPEPSKFSSGSV----GSSIARP 104
Query: 633 N 635
N
Sbjct: 105 N 105
>05_06_0078 - 25412770-25413852
Length = 360
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3
Query: 447 IGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNHLRGSSMLQSGNVHGLGGSSLI 626
+GG+ G + + G F+ + GGS G + GS G G GG +
Sbjct: 135 VGGNGFAGEGGDVVGGSGFAGEGGDVAGGSGFAGEGGDVAGGSGFAGEGGDTGEGGDVIG 194
Query: 627 G 629
G
Sbjct: 195 G 195
>03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684
Length = 222
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = -1
Query: 613 PPRP*TFPLCNMLDPLKWFKFLPIRVDPPSPPKCLLENAPPSIPFAFLPI-----SELPP 449
PP P + P P + F FL PPSPP P++ + S PP
Sbjct: 35 PPTPPSAPPSCASQPHRLFFFLRTVQPPPSPPSTTATVVVPTLAMEWHEALGGTGSASPP 94
Query: 448 IPFRLRFS 425
+P R R S
Sbjct: 95 LPRRSRRS 102
>01_03_0076 -
12241408-12241545,12241719-12241790,12242173-12242289,
12243307-12245127,12245361-12245810
Length = 865
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 532 PPSPPKCLLENAPPSIPFAFLPISELPPIPFRLRFS*RTRNRKMSAIS 389
PP PP P ++PF P S P+PF R + + +A+S
Sbjct: 57 PPGPPVFSSPLRPAAVPFRATPASP-QPVPFASRGGGYSSSSSSAAVS 103
>01_02_0031 + 10364487-10365407
Length = 306
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 532 PPSPPKCLLENAPPSIPFA-FLPISELPPIPF 440
PP PP +L APP +P+S +PP F
Sbjct: 181 PPPPPAPMLPLAPPPTHVTPAMPLSSMPPPAF 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,927,782
Number of Sequences: 37544
Number of extensions: 375342
Number of successful extensions: 1527
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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