Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20a21
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               24   1.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.8  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   7.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.6  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 327 ILHKNLTWLILFAVDEYKQKEDIAD--ILRFLVRY 425
           I+H  LT+     + E  Q+EDI++  I ++L  Y
Sbjct: 41  IIHMGLTFKDFIKMQELLQEEDISEGNIKKYLTNY 75


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 489  EGGAFSSKHLGGLGG 533
            EGG  S   LGGLGG
Sbjct: 1704 EGGGGSLAGLGGLGG 1718



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 423  YENRNLNGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNH 563
            Y    L+  GG SL G    G  GGA  +   G    +TL+   + H
Sbjct: 1697 YATFQLSEGGGGSLAGLGGLGGLGGAAEASAAGLHPNNTLLHSFMYH 1743


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 489  EGGAFSSKHLGGLGG 533
            EGG  S   LGGLGG
Sbjct: 1700 EGGGGSLAGLGGLGG 1714



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 423  YENRNLNGIGGSSLIGRNANGIEGGAFSSKHLGGLGGSTLIGRNLNH 563
            Y    L+  GG SL G    G  GGA  +   G    +TL+   + H
Sbjct: 1693 YATFQLSEGGGGSLAGLGGLGGLGGAAEASAAGLHPNNTLLHSFMYH 1739


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 171 VHYFKITIQDLILLH*SVKYKSFFR 245
           ++YF  TI  ++    S+KY++ F+
Sbjct: 316 LYYFSTTINPILYNLMSIKYRNAFK 340


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 146 IYEFTCTNCT 175
           +Y++ C NCT
Sbjct: 42  VYQYRCANCT 51


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 594 FHSVTC*ILLNGSNFYR 544
           FHS+    LLN S+ YR
Sbjct: 461 FHSIVLGSLLNPSHMYR 477


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,921
Number of Sequences: 438
Number of extensions: 4692
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)