Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a15
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-10|AAV28351.1| 513|Caenorhabditis elegans Hypothetical p... 32 0.21
AC024750-6|AAF60442.2| 341|Caenorhabditis elegans Seven tm rece... 32 0.21
AC024750-7|AAF60436.2| 341|Caenorhabditis elegans Seven tm rece... 31 0.27
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 31 0.36
AF022975-8|AAB70667.4| 195|Caenorhabditis elegans Hypothetical ... 31 0.36
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 30 0.83
Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical pr... 29 1.1
U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine rec... 29 1.1
AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein. 29 1.1
AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic avoid... 29 1.1
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 29 1.5
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical pr... 29 1.9
U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical pr... 29 1.9
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 29 1.9
U13019-14|AAK84568.2| 316|Caenorhabditis elegans Serpentine rec... 27 7.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 7.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 7.8
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 7.8
>U50301-10|AAV28351.1| 513|Caenorhabditis elegans Hypothetical
protein F20D6.12 protein.
Length = 513
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 429 FIFMCLVYLNICQITI*TIKNVLKNITFLNRLLATCLW 316
FIF CLV L+ + + N+L ++ NRL ATC+W
Sbjct: 395 FIFTCLVVLSYYGVFFNHLGNILLSV---NRLSATCVW 429
>AC024750-6|AAF60442.2| 341|Caenorhabditis elegans Seven tm
receptor protein 175 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.21
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Frame = +3
Query: 9 ICSTARE-FIVEVVQGPYC-CLFRRI----KSFM----FFGFSKIVSVVKVIFLL--YSD 152
I T +E F +E+ Y C+F I K F+ F G++ +S++ V FL+ ++
Sbjct: 167 IRKTVKESFNIEMENAEYAGCVFYPIDTNGKQFINWRSFMGYTGYLSIMAVAFLIISFAG 226
Query: 153 CKSCIISCSLLMSGAGELA 209
CKSC + +LL G E +
Sbjct: 227 CKSCYLVSNLLDQGESEFS 245
>AC024750-7|AAF60436.2| 341|Caenorhabditis elegans Seven tm
receptor protein 174 protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 93 FFGFSKIVSVVKVIFLL--YSDCKSCIISCSLLMSGAGELA 209
F G++ +S++ V FL+ ++ CKSC + +LL G E +
Sbjct: 205 FMGYTGYLSIMAVAFLIISFAGCKSCYLVSNLLDQGESEFS 245
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -1
Query: 316 GAQGKVFDPLCEVKTQLCAIQESLNEAISTL-NVHAAANSPAPDIN--KLQDMIQDLQSE 146
G QGK D + E+ ++ ++ +++A+ L + A D N K M+QD+Q
Sbjct: 455 GMQGKDRDSIIELVMEISGVKGIVHDAMKMLKSTEMPELDLAMDANAKKSLQMVQDIQKS 514
Query: 145 YNKK 134
YN+K
Sbjct: 515 YNRK 518
>AF022975-8|AAB70667.4| 195|Caenorhabditis elegans Hypothetical
protein K09C6.9 protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.36
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = -1
Query: 295 DPLCEVKTQLCAIQESLNEAISTLNVHAAAN---SPAPDINKLQDMIQDLQSEYNKKITF 125
DP K + C I S+N+AI+ +N+++ N + + ++KL +L K
Sbjct: 60 DPELVSKAKTCVINNSMNKAIAAMNLYSGFNGCTNLSDLVSKLATPFINLCKPVINKALS 119
Query: 124 TTDTILENPK---NIKDLMRLNK 65
T DT N K N K +NK
Sbjct: 120 TLDTCKANNKQTGNAKQTACMNK 142
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 29.9 bits (64), Expect = 0.83
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 316 GAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSP 197
G Q +FDPL V +L + S+NE +++ A +N P
Sbjct: 538 GWQELIFDPLPVVYIRLVGTRNSINEVFHVVHLEAPSNVP 577
>Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical
protein W05H5.5 protein.
Length = 358
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 92 VFWILQNCISGKSNFFIVFRLQIL---YHILQLVDVWRGRVGGRMNVQS*NGLVETLLNR 262
VF++ I+GK I +RL L I + D+W +G +NV + NGL E +L
Sbjct: 71 VFFLWYVLIAGKL-IIIAYRLDFLKIDIPIGEHTDIWTDDIGKMLNVNNLNGL-ELILLS 128
Query: 263 TQLRFYF 283
L++Y+
Sbjct: 129 GFLQWYY 135
>U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 9 protein.
Length = 336
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 83 ILYVFWILQNCISGKSNFFIVFRL-QILYHILQLVDVW 193
ILYV W+ + + FF+++ + I+ IL L+D++
Sbjct: 46 ILYVIWVKHRKVYSRHQFFVIYSMDSIVGFILLLLDIF 83
>AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein.
Length = 820
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 283 EVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKK 134
+V QL +I ESL ++ + +++ ANS P+ + + DL + K
Sbjct: 542 QVLVQLASIYESLEDSAQAIELYSQANSLVPNDPAILSKLADLYDQEGDK 591
>AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic
avoidance abnormal protein5 protein.
Length = 820
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 283 EVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKK 134
+V QL +I ESL ++ + +++ ANS P+ + + DL + K
Sbjct: 542 QVLVQLASIYESLEDSAQAIELYSQANSLVPNDPAILSKLADLYDQEGDK 591
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1
Query: 283 EVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNKKITFTTDTILE 104
+++ Q+ ++ S+N+ +S S P KL D+ ++E+N F I E
Sbjct: 361 QLRNQVYRLESSINQIMSRKCTIRYGTSIMPSFAKLIDVAPPTEAEFNNPCLFPEKRIAE 420
Query: 103 N 101
N
Sbjct: 421 N 421
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 13 VALPGSSLSKSCKALIVVCSGALNPLCFLDSPKLYQW 123
+A G+ +S C LI++ + L PLCFL SP+ + W
Sbjct: 172 IAFSGTHIS-FC-ILILIVATCLLPLCFLKSPQDFWW 206
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 1.9
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = -1
Query: 316 GAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNK 137
GA G+ F ++ L A L IS L +A+ P D +KL ++QD +K
Sbjct: 259 GATGERFKEATKINLSLSA----LGNVISALVDAKSAHIPYRD-SKLTRLLQDSLGGNSK 313
Query: 136 KITFTTDTILENPKNIKDLMRLNK 65
T T KNIK+ ++N+
Sbjct: 314 TETLGTLRYANRAKNIKNQPKINE 337
>Z30662-7|CAA83141.2| 566|Caenorhabditis elegans Hypothetical
protein T16H12.6 protein.
Length = 566
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 131 NFFIVFRLQILYHILQLVDVWRGRV 205
N +FRL +LYH V VWR V
Sbjct: 157 NIIKIFRLALLYHTTLAVRVWRAMV 181
>U22831-6|AAK20068.1| 579|Caenorhabditis elegans Hypothetical
protein F47D12.7 protein.
Length = 579
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 131 NFFIVFRLQILYHILQLVDVWRGRV 205
N +FRL +LYH V VWR V
Sbjct: 157 NIIKIFRLALLYHTTLAVRVWRSMV 181
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 28.7 bits (61), Expect = 1.9
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = -1
Query: 316 GAQGKVFDPLCEVKTQLCAIQESLNEAISTLNVHAAANSPAPDINKLQDMIQDLQSEYNK 137
GA G+ F ++ L A L IS L +A+ P D +KL ++QD +K
Sbjct: 222 GATGERFKEATKINLSLSA----LGNVISALVDAKSAHIPYRD-SKLTRLLQDSLGGNSK 276
Query: 136 KITFTTDTILENPKNIKDLMRLNK 65
T T KNIK+ ++N+
Sbjct: 277 TETLGTLRYANRAKNIKNQPKINE 300
>U13019-14|AAK84568.2| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 4 protein.
Length = 316
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 83 ILYVFWILQNCISGKSNFFIVFRLQILYHILQL 181
IL V W N I KS+FF ++ L L ++Q+
Sbjct: 34 ILIVIWGTHNKIYLKSSFFTIWSLDSLVSLVQM 66
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 237 PFQL*TFMRPPTRPRQTSTSCKI 169
PFQ+ T PPT TSTSC +
Sbjct: 14247 PFQVPTVEFPPTIDNVTSTSCSL 14269
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 237 PFQL*TFMRPPTRPRQTSTSCKI 169
PFQ+ T PPT TSTSC +
Sbjct: 14247 PFQVPTVEFPPTIDNVTSTSCSL 14269
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 90 MFFGFSKIVSVVKVIFLLYSDCKSCIISCSLL 185
M F +V+K+I L SDC+ + S SL+
Sbjct: 183 MLFKMLGFQNVIKIIHALLSDCRIVLASSSLM 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,880,180
Number of Sequences: 27780
Number of extensions: 189752
Number of successful extensions: 567
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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