Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20a12
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 34 0.11
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 33 0.26
02_05_1000 + 33417357-33417600,33417692-33417744,33418376-334184... 32 0.35
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 0.61
11_06_0610 - 25449085-25453284 31 0.81
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 30 1.9
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 30 1.9
05_07_0219 - 28474661-28475146,28475979-28476644 29 2.5
02_04_0452 + 23044190-23045227 29 2.5
11_03_0188 - 11338013-11338976,11339843-11340183 29 3.3
09_02_0615 - 11251869-11252832,11253699-11254039 29 3.3
06_03_0490 - 21375400-21376363,21377230-21377570 29 3.3
06_02_0143 - 12266120-12267083,12267950-12268290 29 3.3
06_02_0141 + 12259098-12259438,12260305-12261268 29 3.3
05_07_0240 + 28606345-28607316 29 3.3
02_04_0118 + 19924184-19924524,19925391-19926354 29 3.3
05_06_0155 - 26028923-26030263 29 4.3
04_01_0041 - 464695-464850,467485-469029 29 4.3
01_05_0227 - 19512866-19514983 29 4.3
12_02_0329 + 17585046-17585561 28 5.7
09_02_0252 - 6315834-6315959,6316074-6317018 28 5.7
08_02_0875 + 22103903-22106293 28 5.7
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 28 5.7
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 5.7
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 28 5.7
01_06_1293 - 36050847-36051304,36052343-36052826 28 5.7
07_01_0544 + 4012457-4012796,4012897-4013069 28 7.5
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 7.5
10_07_0148 + 13413078-13414295 27 9.9
08_02_1474 - 27365548-27366054 27 9.9
02_04_0486 - 23351960-23353093 27 9.9
02_04_0483 - 23305492-23306625 27 9.9
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 474 PPLHPLALLSAVSPLCIKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINPLTP 635
PP P+ + + I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 9 PPPPPMIGRAGNLTVFITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +3
Query: 474 PPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFA 653
PPL P + +S ++PP P T S P F P P +T+ L A
Sbjct: 360 PPLPPATVEPVISAPMVEPPPPPAMITPLPPSTPVFTLPPPPPVTTAPSTALPAGASAAA 419
Query: 654 P 656
P
Sbjct: 420 P 420
>02_05_1000 +
33417357-33417600,33417692-33417744,33418376-33418413,
33418720-33419114,33420092-33420221,33420512-33421343
Length = 563
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 453 LKEAMCWPPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISIN 623
+K A P +HPL + + PP PA +A+ T S + P+ DL+S I+
Sbjct: 120 IKPARPQPQMHPLTAAAKHAITIPPPPPPAAAASYTSSPSSGTSDPSVLDLSSAEID 176
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 540 AISATSTRSSNPRFHTPTTP 599
A S+T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSIS-INPLTPYXKEFAP 656
PP+P A+S P HTP+ P+ T S +P TP K +P
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP 661
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLT-SISINPLTPYXKEFAP 656
PP+P A+S P HTP+ P T +P TP + +P
Sbjct: 651 PPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP 694
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 510 SPLCIKPPSPAISATSTRSSNPRFHTPTTPD 602
SP + P +PA S++S SS+P TP + D
Sbjct: 326 SPQSVVPSNPAASSSSVASSSPALATPESRD 356
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 483 HPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAP 656
+P+ ++A P+P ++A S+R NP PD+T+ ++ + Y + +P
Sbjct: 431 NPVGYITASDARLGVKPAPVMAAFSSRGPNPITPQILKPDITAPGVSVIAAYSEAVSP 488
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 474 PPLHPLALLSAVSPLCIKPPSPAIS----ATSTRSSNPRFHTPTTPDLTSISINPLTPYX 641
PP P L SA +P PPSPA S AT+T ++ P TPT P ++ + P
Sbjct: 74 PPPSPPPL-SATTPHP-PPPSPATSSSRTATATATATPTSPTPTPPPTSATLLWPRPRPT 131
Query: 642 KE 647
KE
Sbjct: 132 KE 133
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 475 HPFILSHYYRRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 597
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>11_03_0188 - 11338013-11338976,11339843-11340183
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>09_02_0615 - 11251869-11252832,11253699-11254039
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>06_03_0490 - 21375400-21376363,21377230-21377570
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>06_02_0143 - 12266120-12267083,12267950-12268290
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>06_02_0141 + 12259098-12259438,12260305-12261268
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>05_07_0240 + 28606345-28607316
Length = 323
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 474 PPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPR 578
P LHPL+ + + P+PA +A S+RSS +
Sbjct: 9 PNLHPLSPSPSAAAAAAATPTPAAAAASSRSSRSK 43
>02_04_0118 + 19924184-19924524,19925391-19926354
Length = 434
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 462 AMCWPPLHPLALLSAVSPLCIKPPSPAIS-ATSTRSSNPRFHTPTTP 599
A PPL + A SP ++PP+P+ S A + SS+P T P
Sbjct: 39 ATAQPPLPASSPPEAPSPATVQPPTPSSSPAVAAPSSSPAVPMSTMP 85
>05_06_0155 - 26028923-26030263
Length = 446
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 477 PLHPLALLSAVSPLCIKPPSPAISATSTRSSNPR--FHTPTTPDLTS 611
P H LA+ + KPPS A + + + +SNPR FH +P S
Sbjct: 9 PRHGLAVTVVLIEPPAKPPSFAAAVSRSMASNPRITFHVMPSPSCHS 55
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 239 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 415
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 416 TVD 424
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 456 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 364
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>12_02_0329 + 17585046-17585561
Length = 171
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 559 VDVAEIAGEGGLMHKGETADSNARG*RGGQHIASFNCDVSSSPTKVNCDGYFEARGG 389
V VA+ +G+G K TA S G GG+ A++ C + C G+ +GG
Sbjct: 91 VIVADASGDGSAAPKSGTAGSTHPGPEGGRSAAAWLCRSHNH----RCHGHGGGKGG 143
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 498 LSAVSPLCIKPPSPAISATSTRSSNPRFHTP 590
LS+ +P + P SP +S +S+R+ +PR H P
Sbjct: 37 LSSTTPGPV-PSSPRLSTSSSRTPSPRAHRP 66
>08_02_0875 + 22103903-22106293
Length = 796
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAP 656
P+P ++A S R NP+ PDL + +N L + P
Sbjct: 506 PAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGP 547
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 489 LALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKE 647
+A+ L P SP T P PD+T IS+NP P +E
Sbjct: 1040 VAISPTAKSLAAYPKSPFQLKTPENGVAPYGEVKPLPDITPISLNPKEPETEE 1092
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 444 TSQLKEAMCWPPLHPLALLSAVSPLCIKPPSPA 542
T+ +K + C+PP P + V P+ + PP P+
Sbjct: 661 TAIVKGSTCYPPPPPPSSTPPVEPVAVFPPPPS 693
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 435 LLLTSQLKEAMCWPPLHPLALLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSI 614
LLL S PP P + + I+ P+P+ + + S +PR T +P T
Sbjct: 50 LLLLSSSDSDTDEPPARPSPIAQLKTLASIRAPAPSPKPSPSPSPSPRRSTSASPSATLS 109
Query: 615 SI 620
S+
Sbjct: 110 SL 111
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 474 PPLH-PLA--LLSAVSPLCIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXK 644
P LH PLA A++P + PP P + T+T + N TP ++ N + Y +
Sbjct: 123 PVLHRPLARPFPLAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNNASYYPQ 182
Query: 645 EFAP 656
+ P
Sbjct: 183 QQTP 186
>07_01_0544 + 4012457-4012796,4012897-4013069
Length = 170
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 519 CIKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAP 656
C P + S ++ P TPTTP T P TP AP
Sbjct: 102 CKVQTPPVSNCKSGAAAPPAGQTPTTPAGTGSKATPATPVGSGVAP 147
>06_01_0018 +
194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLT 608
PSP +A TRSS+ R H TP T
Sbjct: 9 PSPTSTARETRSSSARGHASPTPTPT 34
>10_07_0148 + 13413078-13414295
Length = 405
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 483 HPLALLSAVSPLCIKPPSPAISATSTR 563
H +SAV+ +C PP P AT+TR
Sbjct: 365 HRAVDVSAVAAVCRPPPPPGAPATATR 391
>08_02_1474 - 27365548-27366054
Length = 168
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 613 MDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETADSNARG*RGG 473
M G VGVW R D AG G + +G A RG RGG
Sbjct: 78 MGALCGEVGVWRRKIGDSRRSGGAAGGGAAVGRG--AAVGGRGARGG 122
>02_04_0486 - 23351960-23353093
Length = 377
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 431 WTTADVTVEGGNVLATPSSSRITIGGL 511
W D VEG +LA P S+ + GGL
Sbjct: 172 WELTDFDVEGPQLLAAPISNPVLHGGL 198
>02_04_0483 - 23305492-23306625
Length = 377
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 431 WTTADVTVEGGNVLATPSSSRITIGGL 511
W D VEG +LA P S+ + GGL
Sbjct: 172 WELTDFDVEGPQLLAAPISNPVLHGGL 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,485,804
Number of Sequences: 37544
Number of extensions: 371048
Number of successful extensions: 1604
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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